Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TTC39BQ5VTQ0 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TTC39BQ5VTQ0 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TTC39BQ5VTQ0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TTC39BQ5VTQ0 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.52■□□□□ 0.24
TTC39BQ5VTQ0 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TTC39BQ5VTQ0 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TTC39BQ5VTQ0 AC022144.1-201ENST00000602255 1580 ntBASIC16.52■□□□□ 0.24
TTC39BQ5VTQ0 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TTC39BQ5VTQ0 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.52■□□□□ 0.24
TTC39BQ5VTQ0 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.52■□□□□ 0.24
TTC39BQ5VTQ0 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.52■□□□□ 0.24
TTC39BQ5VTQ0 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TTC39BQ5VTQ0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.52■□□□□ 0.24
TTC39BQ5VTQ0 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TTC39BQ5VTQ0 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TTC39BQ5VTQ0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.52■□□□□ 0.24
TTC39BQ5VTQ0 AC009477.1-201ENST00000452936 217 ntBASIC16.52■□□□□ 0.24
TTC39BQ5VTQ0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.52■□□□□ 0.24
TTC39BQ5VTQ0 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.52■□□□□ 0.24
TTC39BQ5VTQ0 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.52■□□□□ 0.24
TTC39BQ5VTQ0 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TTC39BQ5VTQ0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TTC39BQ5VTQ0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.52■□□□□ 0.24
TTC39BQ5VTQ0 AL033527.5-202ENST00000641632 1098 ntBASIC16.52■□□□□ 0.24
TTC39BQ5VTQ0 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
TTC39BQ5VTQ0 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
TTC39BQ5VTQ0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TTC39BQ5VTQ0 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
TTC39BQ5VTQ0 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TTC39BQ5VTQ0 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TTC39BQ5VTQ0 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.52■□□□□ 0.23
TTC39BQ5VTQ0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
TTC39BQ5VTQ0 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TTC39BQ5VTQ0 AL513477.1-201ENST00000602865 2407 ntBASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 AC073347.1-201ENST00000421633 2643 ntBASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 DBET-201ENST00000630918 3363 ntBASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 FAM8A3P-201ENST00000427218 844 ntBASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 AL844908.2-201ENST00000609461 460 ntBASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 KRT8P37-201ENST00000451609 1420 ntBASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TTC39BQ5VTQ0 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 BTBD7P1-201ENST00000447253 1453 ntBASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms