Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 GPX4-206ENST00000588919 803 ntTSL 2 BASIC21.69■■□□□ 1.06
CDCA8Q53HL2 UBL5-208ENST00000593087 320 ntTSL 3 BASIC21.69■■□□□ 1.06
CDCA8Q53HL2 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDCA8Q53HL2 AL033527.5-201ENST00000641382 801 ntBASIC21.69■■□□□ 1.06
CDCA8Q53HL2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDCA8Q53HL2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC21.69■■□□□ 1.06
CDCA8Q53HL2 HNRNPA1P48-201ENST00000562726 1377 ntBASIC21.69■■□□□ 1.06
CDCA8Q53HL2 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDCA8Q53HL2 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDCA8Q53HL2 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDCA8Q53HL2 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDCA8Q53HL2 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC21.68■■□□□ 1.06
CDCA8Q53HL2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC21.68■■□□□ 1.06
CDCA8Q53HL2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDCA8Q53HL2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDCA8Q53HL2 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDCA8Q53HL2 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDCA8Q53HL2 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC21.68■■□□□ 1.06
CDCA8Q53HL2 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
CDCA8Q53HL2 AL162726.2-201ENST00000438986 1017 ntBASIC21.68■■□□□ 1.06
CDCA8Q53HL2 KRT17P7-201ENST00000451704 1104 ntBASIC21.68■■□□□ 1.06
CDCA8Q53HL2 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDCA8Q53HL2 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDCA8Q53HL2 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CDCA8Q53HL2 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC21.68■■□□□ 1.06
CDCA8Q53HL2 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDCA8Q53HL2 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC21.68■■□□□ 1.06
CDCA8Q53HL2 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDCA8Q53HL2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDCA8Q53HL2 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CDCA8Q53HL2 AC022188.1-201ENST00000620960 1664 ntBASIC21.68■■□□□ 1.06
CDCA8Q53HL2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDCA8Q53HL2 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDCA8Q53HL2 AC127383.1-201ENST00000444697 1800 ntBASIC21.68■■□□□ 1.06
CDCA8Q53HL2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDCA8Q53HL2 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CDCA8Q53HL2 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDCA8Q53HL2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC21.68■■□□□ 1.06
CDCA8Q53HL2 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDCA8Q53HL2 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDCA8Q53HL2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDCA8Q53HL2 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
CDCA8Q53HL2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC21.67■■□□□ 1.06
CDCA8Q53HL2 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC21.67■■□□□ 1.06
CDCA8Q53HL2 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDCA8Q53HL2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDCA8Q53HL2 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CDCA8Q53HL2 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CDCA8Q53HL2 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDCA8Q53HL2 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CDCA8Q53HL2 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC21.67■■□□□ 1.06
CDCA8Q53HL2 AL512384.1-201ENST00000406683 331 ntBASIC21.67■■□□□ 1.06
CDCA8Q53HL2 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
CDCA8Q53HL2 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDCA8Q53HL2 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDCA8Q53HL2 INE1-201ENST00000456273 945 ntBASIC21.67■■□□□ 1.06
CDCA8Q53HL2 AC026410.3-201ENST00000514280 936 ntBASIC21.67■■□□□ 1.06
CDCA8Q53HL2 ENPP7P5-201ENST00000541031 1031 ntBASIC21.67■■□□□ 1.06
CDCA8Q53HL2 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC21.67■■□□□ 1.06
CDCA8Q53HL2 AC239800.4-201ENST00000603712 296 ntBASIC21.67■■□□□ 1.06
CDCA8Q53HL2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDCA8Q53HL2 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDCA8Q53HL2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC21.67■■□□□ 1.06
CDCA8Q53HL2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDCA8Q53HL2 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDCA8Q53HL2 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDCA8Q53HL2 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC21.67■■□□□ 1.06
CDCA8Q53HL2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC21.67■■□□□ 1.06
CDCA8Q53HL2 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDCA8Q53HL2 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDCA8Q53HL2 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDCA8Q53HL2 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDCA8Q53HL2 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDCA8Q53HL2 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CDCA8Q53HL2 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 GSAP-205ENST00000430584 600 ntTSL 5 BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 VDAC1P7-201ENST00000462417 847 ntBASIC21.66■■□□□ 1.06
CDCA8Q53HL2 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 AC120045.2-201ENST00000567334 178 ntBASIC21.66■■□□□ 1.06
CDCA8Q53HL2 AC124283.3-201ENST00000570869 594 ntBASIC21.66■■□□□ 1.06
CDCA8Q53HL2 PAM16-204ENST00000571941 674 ntTSL 3 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms