Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 GPAA1P2-202ENST00000606848 1787 ntBASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 RPL13P2-201ENST00000440687 659 ntBASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 AC068587.3-201ENST00000526613 355 ntBASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 PTP4A1P2-201ENST00000546033 454 ntBASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 C2orf69P2-201ENST00000562032 1123 ntBASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTC1Q2NKJ3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 HLA-A-202ENST00000376806 1854 ntBASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 KRT8P13-201ENST00000463294 1010 ntBASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 RNA5SP423-201ENST00000517127 109 ntBASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 AC243960.2-201ENST00000600996 747 ntBASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 AC068418.2-201ENST00000577309 3703 ntBASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.87■□□□□ 0.29
CTC1Q2NKJ3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 YBX1P6-201ENST00000442962 1002 ntBASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 AC010328.2-201ENST00000597698 1111 ntBASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms