Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.34□□□□□ -0.11
FOXF1Q12946 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.34□□□□□ -0.11
FOXF1Q12946 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.34□□□□□ -0.11
FOXF1Q12946 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.34□□□□□ -0.11
FOXF1Q12946 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.34□□□□□ -0.11
FOXF1Q12946 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.34□□□□□ -0.11
FOXF1Q12946 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.34□□□□□ -0.11
FOXF1Q12946 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.34□□□□□ -0.11
FOXF1Q12946 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.34□□□□□ -0.11
FOXF1Q12946 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.34□□□□□ -0.11
FOXF1Q12946 AC074044.1-201ENST00000609673 707 ntBASIC14.34□□□□□ -0.11
FOXF1Q12946 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXF1Q12946 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXF1Q12946 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXF1Q12946 AC092127.1-201ENST00000567093 3455 ntBASIC14.34□□□□□ -0.11
FOXF1Q12946 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.34□□□□□ -0.11
FOXF1Q12946 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXF1Q12946 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
FOXF1Q12946 AC022144.1-201ENST00000602255 1580 ntBASIC14.34□□□□□ -0.11
FOXF1Q12946 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.34□□□□□ -0.11
FOXF1Q12946 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FOXF1Q12946 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.34□□□□□ -0.11
FOXF1Q12946 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FOXF1Q12946 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXF1Q12946 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
FOXF1Q12946 Z97205.2-201ENST00000564697 1639 ntBASIC14.33□□□□□ -0.11
FOXF1Q12946 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FOXF1Q12946 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
FOXF1Q12946 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FOXF1Q12946 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.33□□□□□ -0.11
FOXF1Q12946 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
FOXF1Q12946 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
FOXF1Q12946 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXF1Q12946 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.33□□□□□ -0.12
FOXF1Q12946 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXF1Q12946 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXF1Q12946 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXF1Q12946 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXF1Q12946 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FOXF1Q12946 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXF1Q12946 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXF1Q12946 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FOXF1Q12946 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FOXF1Q12946 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.33□□□□□ -0.12
FOXF1Q12946 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FOXF1Q12946 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.33□□□□□ -0.12
FOXF1Q12946 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.33□□□□□ -0.12
FOXF1Q12946 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.33□□□□□ -0.12
FOXF1Q12946 SDHAP3-202ENST00000515467 728 ntBASIC14.33□□□□□ -0.12
FOXF1Q12946 ZNF890P-202ENST00000530367 1156 ntBASIC14.33□□□□□ -0.12
FOXF1Q12946 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.33□□□□□ -0.12
FOXF1Q12946 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.33□□□□□ -0.12
FOXF1Q12946 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.33□□□□□ -0.12
FOXF1Q12946 AL355385.1-201ENST00000606123 409 ntBASIC14.33□□□□□ -0.12
FOXF1Q12946 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FOXF1Q12946 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXF1Q12946 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXF1Q12946 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXF1Q12946 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
FOXF1Q12946 AC092850.2-201ENST00000623821 2697 ntBASIC14.33□□□□□ -0.12
FOXF1Q12946 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXF1Q12946 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FOXF1Q12946 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXF1Q12946 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.33□□□□□ -0.12
FOXF1Q12946 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXF1Q12946 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.33□□□□□ -0.12
FOXF1Q12946 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXF1Q12946 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXF1Q12946 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.32□□□□□ -0.12
FOXF1Q12946 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXF1Q12946 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FOXF1Q12946 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.32□□□□□ -0.12
FOXF1Q12946 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.32□□□□□ -0.12
FOXF1Q12946 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.32□□□□□ -0.12
FOXF1Q12946 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXF1Q12946 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXF1Q12946 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.32□□□□□ -0.12
FOXF1Q12946 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXF1Q12946 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.32□□□□□ -0.12
FOXF1Q12946 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXF1Q12946 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.32□□□□□ -0.12
FOXF1Q12946 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FOXF1Q12946 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
FOXF1Q12946 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.32□□□□□ -0.12
FOXF1Q12946 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.32□□□□□ -0.12
FOXF1Q12946 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.32□□□□□ -0.12
FOXF1Q12946 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.32□□□□□ -0.12
FOXF1Q12946 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.32□□□□□ -0.12
FOXF1Q12946 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
FOXF1Q12946 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.32□□□□□ -0.12
FOXF1Q12946 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.32□□□□□ -0.12
FOXF1Q12946 AC009407.1-201ENST00000568958 598 ntBASIC14.32□□□□□ -0.12
FOXF1Q12946 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.32□□□□□ -0.12
FOXF1Q12946 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
FOXF1Q12946 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FOXF1Q12946 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
FOXF1Q12946 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
FOXF1Q12946 LINC01115-203ENST00000606068 577 ntBASIC14.32□□□□□ -0.12
FOXF1Q12946 AC008738.7-201ENST00000609744 511 ntBASIC14.32□□□□□ -0.12
FOXF1Q12946 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms