Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RIPK4P57078 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC20.64■□□□□ 0.89
RIPK4P57078 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RIPK4P57078 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
RIPK4P57078 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RIPK4P57078 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIPK4P57078 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC20.63■□□□□ 0.89
RIPK4P57078 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC20.63■□□□□ 0.89
RIPK4P57078 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RIPK4P57078 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RIPK4P57078 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RIPK4P57078 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RIPK4P57078 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIPK4P57078 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIPK4P57078 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC20.63■□□□□ 0.89
RIPK4P57078 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIPK4P57078 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIPK4P57078 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RIPK4P57078 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RIPK4P57078 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC20.63■□□□□ 0.89
RIPK4P57078 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RIPK4P57078 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC20.63■□□□□ 0.89
RIPK4P57078 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC20.63■□□□□ 0.89
RIPK4P57078 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC20.63■□□□□ 0.89
RIPK4P57078 WASH4P-201ENST00000564273 1246 ntBASIC20.63■□□□□ 0.89
RIPK4P57078 RRP7BP-205ENST00000566851 833 ntBASIC20.63■□□□□ 0.89
RIPK4P57078 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC20.63■□□□□ 0.89
RIPK4P57078 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
RIPK4P57078 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC20.63■□□□□ 0.89
RIPK4P57078 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RIPK4P57078 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIPK4P57078 AC022188.1-201ENST00000620960 1664 ntBASIC20.63■□□□□ 0.89
RIPK4P57078 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIPK4P57078 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC20.63■□□□□ 0.89
RIPK4P57078 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RIPK4P57078 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC20.63■□□□□ 0.89
RIPK4P57078 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RIPK4P57078 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC20.63■□□□□ 0.89
RIPK4P57078 PAUPAR-201ENST00000630360 2965 ntBASIC20.63■□□□□ 0.89
RIPK4P57078 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RIPK4P57078 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIPK4P57078 AL121723.1-201ENST00000445194 1519 ntBASIC20.63■□□□□ 0.89
RIPK4P57078 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIPK4P57078 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIPK4P57078 AC007950.2-201ENST00000615045 2347 ntBASIC20.62■□□□□ 0.89
RIPK4P57078 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RIPK4P57078 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIPK4P57078 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIPK4P57078 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIPK4P57078 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIPK4P57078 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIPK4P57078 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIPK4P57078 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIPK4P57078 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC20.62■□□□□ 0.89
RIPK4P57078 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC20.62■□□□□ 0.89
RIPK4P57078 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIPK4P57078 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC20.62■□□□□ 0.89
RIPK4P57078 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC20.62■□□□□ 0.89
RIPK4P57078 MYCLP2-201ENST00000449268 967 ntBASIC20.62■□□□□ 0.89
RIPK4P57078 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC20.62■□□□□ 0.89
RIPK4P57078 COQ6-210ENST00000554920 649 ntTSL 3 BASIC20.62■□□□□ 0.89
RIPK4P57078 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC20.62■□□□□ 0.89
RIPK4P57078 AC093726.1-201ENST00000608064 963 ntBASIC20.62■□□□□ 0.89
RIPK4P57078 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC20.62■□□□□ 0.89
RIPK4P57078 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC20.62■□□□□ 0.89
RIPK4P57078 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC20.62■□□□□ 0.89
RIPK4P57078 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIPK4P57078 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIPK4P57078 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIPK4P57078 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIPK4P57078 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RIPK4P57078 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC20.62■□□□□ 0.89
RIPK4P57078 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIPK4P57078 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RIPK4P57078 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIPK4P57078 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RIPK4P57078 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RIPK4P57078 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RIPK4P57078 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RIPK4P57078 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RIPK4P57078 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RIPK4P57078 TP73-209ENST00000603362 1668 ntTSL 5 BASIC20.61■□□□□ 0.89
RIPK4P57078 WARS-232ENST00000556645 2508 ntTSL 5 BASIC20.61■□□□□ 0.89
RIPK4P57078 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RIPK4P57078 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RIPK4P57078 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RIPK4P57078 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC20.61■□□□□ 0.89
RIPK4P57078 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC20.61■□□□□ 0.89
RIPK4P57078 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC20.61■□□□□ 0.89
RIPK4P57078 PNKD-204ENST00000436005 978 ntTSL 5 BASIC20.61■□□□□ 0.89
RIPK4P57078 CTBP2P3-201ENST00000585629 1255 ntBASIC20.61■□□□□ 0.89
RIPK4P57078 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC20.61■□□□□ 0.89
RIPK4P57078 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RIPK4P57078 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RIPK4P57078 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC20.61■□□□□ 0.89
RIPK4P57078 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RIPK4P57078 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
RIPK4P57078 AC009090.5-201ENST00000624886 2285 ntBASIC20.61■□□□□ 0.89
RIPK4P57078 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RIPK4P57078 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms