Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC015910.1-201ENST00000579400 975 ntBASIC17.82■□□□□ 0.44
USP11P51784 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
USP11P51784 AC000095.1-201ENST00000603208 874 ntBASIC17.82■□□□□ 0.44
USP11P51784 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
USP11P51784 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
USP11P51784 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP11P51784 CICP13-201ENST00000422015 2789 ntBASIC17.82■□□□□ 0.44
USP11P51784 AC132872.4-202ENST00000622924 2756 ntBASIC17.82■□□□□ 0.44
USP11P51784 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
USP11P51784 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.82■□□□□ 0.44
USP11P51784 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP11P51784 AL121723.1-201ENST00000445194 1519 ntBASIC17.82■□□□□ 0.44
USP11P51784 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP11P51784 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP11P51784 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP11P51784 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP11P51784 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP11P51784 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP11P51784 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
USP11P51784 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP11P51784 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP11P51784 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USP11P51784 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP11P51784 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP11P51784 AC105250.1-201ENST00000509378 2057 ntBASIC17.81■□□□□ 0.44
USP11P51784 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
USP11P51784 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP11P51784 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP11P51784 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
USP11P51784 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP11P51784 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
USP11P51784 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.81■□□□□ 0.44
USP11P51784 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.81■□□□□ 0.44
USP11P51784 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP11P51784 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP11P51784 CRB3P1-201ENST00000449338 276 ntBASIC17.81■□□□□ 0.44
USP11P51784 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.81■□□□□ 0.44
USP11P51784 AC190387.1-201ENST00000551683 408 ntBASIC17.81■□□□□ 0.44
USP11P51784 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
USP11P51784 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.81■□□□□ 0.44
USP11P51784 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.81■□□□□ 0.44
USP11P51784 SPDYE22P-201ENST00000582158 798 ntBASIC17.81■□□□□ 0.44
USP11P51784 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.81■□□□□ 0.44
USP11P51784 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.81■□□□□ 0.44
USP11P51784 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USP11P51784 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.81■□□□□ 0.44
USP11P51784 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
USP11P51784 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.81■□□□□ 0.44
USP11P51784 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
USP11P51784 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
USP11P51784 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.81■□□□□ 0.44
USP11P51784 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP11P51784 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.81■□□□□ 0.44
USP11P51784 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP11P51784 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
USP11P51784 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP11P51784 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP11P51784 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.81■□□□□ 0.44
USP11P51784 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP11P51784 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP11P51784 CLK3P2-201ENST00000427566 1453 ntBASIC17.81■□□□□ 0.44
USP11P51784 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
USP11P51784 AC092127.1-201ENST00000567093 3455 ntBASIC17.81■□□□□ 0.44
USP11P51784 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP11P51784 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
USP11P51784 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP11P51784 AC105917.1-201ENST00000506637 2539 ntBASIC17.8■□□□□ 0.44
USP11P51784 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
USP11P51784 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP11P51784 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.8■□□□□ 0.44
USP11P51784 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP11P51784 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP11P51784 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP11P51784 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP11P51784 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.8■□□□□ 0.44
USP11P51784 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP11P51784 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP11P51784 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
USP11P51784 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
USP11P51784 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.8■□□□□ 0.44
USP11P51784 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.8■□□□□ 0.44
USP11P51784 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.8■□□□□ 0.44
USP11P51784 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
USP11P51784 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP11P51784 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
USP11P51784 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP11P51784 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP11P51784 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP11P51784 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.8■□□□□ 0.44
USP11P51784 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
USP11P51784 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP11P51784 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP11P51784 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP11P51784 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.79■□□□□ 0.44
USP11P51784 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.79■□□□□ 0.44
USP11P51784 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP11P51784 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.79■□□□□ 0.44
USP11P51784 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
USP11P51784 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.79■□□□□ 0.44
USP11P51784 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms