Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MTHFRP42898 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MTHFRP42898 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.53■□□□□ 0.24
MTHFRP42898 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MTHFRP42898 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.52■□□□□ 0.24
MTHFRP42898 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.52■□□□□ 0.24
MTHFRP42898 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
MTHFRP42898 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MTHFRP42898 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
MTHFRP42898 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
MTHFRP42898 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
MTHFRP42898 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MTHFRP42898 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.52■□□□□ 0.24
MTHFRP42898 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MTHFRP42898 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
MTHFRP42898 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MTHFRP42898 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
MTHFRP42898 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.52■□□□□ 0.24
MTHFRP42898 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
MTHFRP42898 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
MTHFRP42898 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.52■□□□□ 0.24
MTHFRP42898 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MTHFRP42898 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.52■□□□□ 0.24
MTHFRP42898 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MTHFRP42898 AC023310.1-201ENST00000554836 735 ntBASIC16.52■□□□□ 0.24
MTHFRP42898 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.52■□□□□ 0.24
MTHFRP42898 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.52■□□□□ 0.24
MTHFRP42898 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MTHFRP42898 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
MTHFRP42898 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.52■□□□□ 0.24
MTHFRP42898 AC244669.2-201ENST00000612320 853 ntBASIC16.52■□□□□ 0.24
MTHFRP42898 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MTHFRP42898 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
MTHFRP42898 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MTHFRP42898 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.52■□□□□ 0.23
MTHFRP42898 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MTHFRP42898 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MTHFRP42898 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.52■□□□□ 0.23
MTHFRP42898 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.52■□□□□ 0.23
MTHFRP42898 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MTHFRP42898 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
MTHFRP42898 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.51■□□□□ 0.23
MTHFRP42898 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MTHFRP42898 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MTHFRP42898 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MTHFRP42898 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
MTHFRP42898 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MTHFRP42898 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
MTHFRP42898 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MTHFRP42898 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MTHFRP42898 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
MTHFRP42898 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MTHFRP42898 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
MTHFRP42898 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MTHFRP42898 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
MTHFRP42898 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MTHFRP42898 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MTHFRP42898 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.51■□□□□ 0.23
MTHFRP42898 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MTHFRP42898 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MTHFRP42898 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.51■□□□□ 0.23
MTHFRP42898 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.51■□□□□ 0.23
MTHFRP42898 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.51■□□□□ 0.23
MTHFRP42898 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MTHFRP42898 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MTHFRP42898 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.51■□□□□ 0.23
MTHFRP42898 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MTHFRP42898 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.51■□□□□ 0.23
MTHFRP42898 AC106760.1-201ENST00000508690 800 ntBASIC16.51■□□□□ 0.23
MTHFRP42898 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.51■□□□□ 0.23
MTHFRP42898 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.51■□□□□ 0.23
MTHFRP42898 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
MTHFRP42898 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.51■□□□□ 0.23
MTHFRP42898 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.51■□□□□ 0.23
MTHFRP42898 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.51■□□□□ 0.23
MTHFRP42898 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.51■□□□□ 0.23
MTHFRP42898 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.51■□□□□ 0.23
MTHFRP42898 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MTHFRP42898 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.51■□□□□ 0.23
MTHFRP42898 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
MTHFRP42898 AC005252.2-201ENST00000624630 1141 ntBASIC16.51■□□□□ 0.23
MTHFRP42898 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
MTHFRP42898 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MTHFRP42898 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MTHFRP42898 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MTHFRP42898 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MTHFRP42898 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MTHFRP42898 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
MTHFRP42898 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MTHFRP42898 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
MTHFRP42898 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
MTHFRP42898 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
MTHFRP42898 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MTHFRP42898 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MTHFRP42898 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MTHFRP42898 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
MTHFRP42898 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.51■□□□□ 0.23
MTHFRP42898 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MTHFRP42898 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.5■□□□□ 0.23
MTHFRP42898 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms