Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
GRIA1P42261 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GRIA1P42261 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.05■□□□□ 0.16
GRIA1P42261 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GRIA1P42261 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.05■□□□□ 0.16
GRIA1P42261 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GRIA1P42261 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.05■□□□□ 0.16
GRIA1P42261 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GRIA1P42261 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GRIA1P42261 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GRIA1P42261 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GRIA1P42261 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GRIA1P42261 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.05■□□□□ 0.16
GRIA1P42261 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GRIA1P42261 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GRIA1P42261 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
GRIA1P42261 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GRIA1P42261 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
GRIA1P42261 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
GRIA1P42261 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
GRIA1P42261 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GRIA1P42261 AL353705.2-201ENST00000428243 662 ntBASIC16.05■□□□□ 0.16
GRIA1P42261 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.05■□□□□ 0.16
GRIA1P42261 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.05■□□□□ 0.16
GRIA1P42261 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GRIA1P42261 AP000344.2-201ENST00000512987 629 ntBASIC16.05■□□□□ 0.16
GRIA1P42261 MIR3687-2-201ENST00000577708 61 ntBASIC16.05■□□□□ 0.16
GRIA1P42261 MIR3687-1-201ENST00000614492 61 ntBASIC16.05■□□□□ 0.16
GRIA1P42261 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.05■□□□□ 0.16
GRIA1P42261 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
GRIA1P42261 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GRIA1P42261 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
GRIA1P42261 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
GRIA1P42261 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GRIA1P42261 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GRIA1P42261 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GRIA1P42261 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GRIA1P42261 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.05■□□□□ 0.16
GRIA1P42261 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.05■□□□□ 0.16
GRIA1P42261 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
GRIA1P42261 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GRIA1P42261 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GRIA1P42261 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
GRIA1P42261 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GRIA1P42261 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GRIA1P42261 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.04■□□□□ 0.16
GRIA1P42261 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
GRIA1P42261 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
GRIA1P42261 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
GRIA1P42261 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.04■□□□□ 0.16
GRIA1P42261 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
GRIA1P42261 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GRIA1P42261 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GRIA1P42261 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GRIA1P42261 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.04■□□□□ 0.16
GRIA1P42261 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
GRIA1P42261 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GRIA1P42261 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
GRIA1P42261 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
GRIA1P42261 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
GRIA1P42261 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.04■□□□□ 0.16
GRIA1P42261 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.04■□□□□ 0.16
GRIA1P42261 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.04■□□□□ 0.16
GRIA1P42261 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.04■□□□□ 0.16
GRIA1P42261 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.04■□□□□ 0.16
GRIA1P42261 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.04■□□□□ 0.16
GRIA1P42261 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
GRIA1P42261 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.04■□□□□ 0.16
GRIA1P42261 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.04■□□□□ 0.16
GRIA1P42261 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.04■□□□□ 0.16
GRIA1P42261 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.04■□□□□ 0.16
GRIA1P42261 AC004835.2-201ENST00000603762 682 ntBASIC16.04■□□□□ 0.16
GRIA1P42261 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.04■□□□□ 0.16
GRIA1P42261 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
GRIA1P42261 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
GRIA1P42261 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
GRIA1P42261 AC006058.4-201ENST00000624016 1670 ntBASIC16.04■□□□□ 0.16
GRIA1P42261 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GRIA1P42261 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GRIA1P42261 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.04■□□□□ 0.16
GRIA1P42261 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GRIA1P42261 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GRIA1P42261 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
GRIA1P42261 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
GRIA1P42261 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GRIA1P42261 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.04■□□□□ 0.16
GRIA1P42261 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
GRIA1P42261 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GRIA1P42261 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.03■□□□□ 0.16
GRIA1P42261 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRIA1P42261 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRIA1P42261 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRIA1P42261 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.03■□□□□ 0.16
GRIA1P42261 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRIA1P42261 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRIA1P42261 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRIA1P42261 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRIA1P42261 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.03■□□□□ 0.16
GRIA1P42261 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
GRIA1P42261 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms