Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP6P35125 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
USP6P35125 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP6P35125 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC20.99■□□□□ 0.95
USP6P35125 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
USP6P35125 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
USP6P35125 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
USP6P35125 LSM5-207ENST00000410044 687 ntTSL 3 BASIC20.99■□□□□ 0.95
USP6P35125 KRTAP10-13P-201ENST00000412914 571 ntBASIC20.99■□□□□ 0.95
USP6P35125 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC20.99■□□□□ 0.95
USP6P35125 POM121L8P-201ENST00000417732 1281 ntBASIC20.99■□□□□ 0.95
USP6P35125 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP6P35125 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC20.99■□□□□ 0.95
USP6P35125 POM121L9P-203ENST00000441984 1285 ntBASIC20.99■□□□□ 0.95
USP6P35125 ARTN-209ENST00000479128 471 ntTSL 3 BASIC20.99■□□□□ 0.95
USP6P35125 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP6P35125 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP6P35125 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP6P35125 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP6P35125 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC20.99■□□□□ 0.95
USP6P35125 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC20.99■□□□□ 0.95
USP6P35125 AC104982.3-201ENST00000581995 514 ntBASIC20.99■□□□□ 0.95
USP6P35125 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC20.99■□□□□ 0.95
USP6P35125 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC20.99■□□□□ 0.95
USP6P35125 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC20.99■□□□□ 0.95
USP6P35125 AL021578.1-201ENST00000613646 709 ntBASIC20.99■□□□□ 0.95
USP6P35125 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.99■□□□□ 0.95
USP6P35125 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP6P35125 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP6P35125 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP6P35125 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
USP6P35125 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
USP6P35125 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP6P35125 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP6P35125 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP6P35125 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP6P35125 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP6P35125 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP6P35125 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP6P35125 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP6P35125 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
USP6P35125 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC20.98■□□□□ 0.95
USP6P35125 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC20.98■□□□□ 0.95
USP6P35125 HLA-DPB2-205ENST00000435074 1188 ntBASIC20.98■□□□□ 0.95
USP6P35125 BX284668.4-201ENST00000453917 508 ntBASIC20.98■□□□□ 0.95
USP6P35125 RNA5SP423-201ENST00000517127 109 ntBASIC20.98■□□□□ 0.95
USP6P35125 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC20.98■□□□□ 0.95
USP6P35125 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP6P35125 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP6P35125 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC20.98■□□□□ 0.95
USP6P35125 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
USP6P35125 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP6P35125 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
USP6P35125 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP6P35125 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP6P35125 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP6P35125 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP6P35125 LRRC59-203ENST00000576448 1531 ntBASIC20.98■□□□□ 0.95
USP6P35125 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP6P35125 AC138028.6-201ENST00000616106 1482 ntBASIC20.98■□□□□ 0.95
USP6P35125 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP6P35125 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC20.97■□□□□ 0.95
USP6P35125 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
USP6P35125 RPS15-201ENST00000233609 534 ntTSL 2 BASIC20.97■□□□□ 0.95
USP6P35125 HNRNPA1P32-201ENST00000396326 963 ntBASIC20.97■□□□□ 0.95
USP6P35125 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC20.97■□□□□ 0.95
USP6P35125 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP6P35125 AC004066.1-201ENST00000502488 802 ntBASIC20.97■□□□□ 0.95
USP6P35125 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
USP6P35125 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC20.97■□□□□ 0.95
USP6P35125 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC20.97■□□□□ 0.95
USP6P35125 RPS15-205ENST00000586686 562 ntTSL 5 BASIC20.97■□□□□ 0.95
USP6P35125 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC20.97■□□□□ 0.95
USP6P35125 RPS15-208ENST00000591804 711 ntTSL 5 BASIC20.97■□□□□ 0.95
USP6P35125 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP6P35125 AC073413.1-201ENST00000603927 732 ntBASIC20.97■□□□□ 0.95
USP6P35125 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC20.97■□□□□ 0.95
USP6P35125 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
USP6P35125 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.97■□□□□ 0.95
USP6P35125 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
USP6P35125 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP6P35125 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC20.97■□□□□ 0.95
USP6P35125 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.97■□□□□ 0.95
USP6P35125 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
USP6P35125 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP6P35125 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.97■□□□□ 0.95
USP6P35125 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP6P35125 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
USP6P35125 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP6P35125 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
USP6P35125 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP6P35125 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC20.96■□□□□ 0.95
USP6P35125 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP6P35125 TPM3P8-201ENST00000330554 643 ntBASIC20.96■□□□□ 0.95
USP6P35125 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
USP6P35125 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP6P35125 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP6P35125 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP6P35125 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP6P35125 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms