Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 AL035252.4-201ENST00000624174 288 ntBASIC15.23■□□□□ 0.03
HTR1EP28566 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTR1EP28566 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HTR1EP28566 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTR1EP28566 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HTR1EP28566 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTR1EP28566 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTR1EP28566 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.23■□□□□ 0.03
HTR1EP28566 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTR1EP28566 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HTR1EP28566 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1EP28566 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.22■□□□□ 0.03
HTR1EP28566 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
HTR1EP28566 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1EP28566 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HTR1EP28566 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1EP28566 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1EP28566 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.22■□□□□ 0.03
HTR1EP28566 AP001282.1-201ENST00000531301 1499 ntBASIC15.22■□□□□ 0.03
HTR1EP28566 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.22■□□□□ 0.03
HTR1EP28566 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1EP28566 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1EP28566 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1EP28566 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1EP28566 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1EP28566 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1EP28566 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1EP28566 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.22■□□□□ 0.03
HTR1EP28566 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1EP28566 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1EP28566 AC067863.1-201ENST00000494933 530 ntBASIC15.22■□□□□ 0.03
HTR1EP28566 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.22■□□□□ 0.03
HTR1EP28566 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.22■□□□□ 0.03
HTR1EP28566 AC093520.2-201ENST00000561830 333 ntBASIC15.22■□□□□ 0.03
HTR1EP28566 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.22■□□□□ 0.03
HTR1EP28566 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.22■□□□□ 0.03
HTR1EP28566 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HTR1EP28566 AF228730.6-201ENST00000641497 218 ntBASIC15.22■□□□□ 0.03
HTR1EP28566 AC084121.3-201ENST00000641716 218 ntBASIC15.22■□□□□ 0.03
HTR1EP28566 AC105233.6-201ENST00000642093 218 ntBASIC15.22■□□□□ 0.03
HTR1EP28566 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.22■□□□□ 0.03
HTR1EP28566 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
HTR1EP28566 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1EP28566 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
HTR1EP28566 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1EP28566 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
HTR1EP28566 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
HTR1EP28566 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1EP28566 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HTR1EP28566 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
HTR1EP28566 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.22■□□□□ 0.03
HTR1EP28566 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1EP28566 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.22■□□□□ 0.03
HTR1EP28566 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.22■□□□□ 0.03
HTR1EP28566 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1EP28566 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HTR1EP28566 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.21■□□□□ 0.03
HTR1EP28566 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HTR1EP28566 AC063926.2-201ENST00000623766 1308 ntBASIC15.21■□□□□ 0.03
HTR1EP28566 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HTR1EP28566 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HTR1EP28566 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HTR1EP28566 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HTR1EP28566 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HTR1EP28566 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.21■□□□□ 0.03
HTR1EP28566 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HTR1EP28566 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HTR1EP28566 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HTR1EP28566 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HTR1EP28566 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
HTR1EP28566 HMGA1P7-201ENST00000406908 502 ntBASIC15.21■□□□□ 0.03
HTR1EP28566 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.21■□□□□ 0.03
HTR1EP28566 INGX-202ENST00000489074 768 ntBASIC15.21■□□□□ 0.03
HTR1EP28566 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.21■□□□□ 0.03
HTR1EP28566 AC112191.1-201ENST00000523689 701 ntBASIC15.21■□□□□ 0.03
HTR1EP28566 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.21■□□□□ 0.03
HTR1EP28566 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HTR1EP28566 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.21■□□□□ 0.03
HTR1EP28566 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.21■□□□□ 0.03
HTR1EP28566 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HTR1EP28566 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HTR1EP28566 C18orf15-201ENST00000623680 2534 ntBASIC15.21■□□□□ 0.03
HTR1EP28566 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HTR1EP28566 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.21■□□□□ 0.03
HTR1EP28566 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HTR1EP28566 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HTR1EP28566 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HTR1EP28566 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.21■□□□□ 0.03
HTR1EP28566 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HTR1EP28566 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.21■□□□□ 0.02
HTR1EP28566 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
HTR1EP28566 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HTR1EP28566 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
HTR1EP28566 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HTR1EP28566 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
HTR1EP28566 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
HTR1EP28566 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
HTR1EP28566 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HTR1EP28566 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
HTR1EP28566 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms