Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN3P26045 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN3P26045 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.14■□□□□ 0.17
PTPN3P26045 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN3P26045 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PTPN3P26045 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN3P26045 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PTPN3P26045 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN3P26045 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.14■□□□□ 0.17
PTPN3P26045 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.14■□□□□ 0.17
PTPN3P26045 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN3P26045 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN3P26045 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN3P26045 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.14■□□□□ 0.17
PTPN3P26045 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.14■□□□□ 0.17
PTPN3P26045 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.14■□□□□ 0.17
PTPN3P26045 AC025678.2-201ENST00000562061 970 ntBASIC16.14■□□□□ 0.17
PTPN3P26045 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.14■□□□□ 0.17
PTPN3P26045 SPDYE12P-201ENST00000618416 771 ntBASIC16.14■□□□□ 0.17
PTPN3P26045 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN3P26045 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN3P26045 AC144831.1-201ENST00000573312 2656 ntBASIC16.14■□□□□ 0.17
PTPN3P26045 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN3P26045 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
PTPN3P26045 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PTPN3P26045 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.14■□□□□ 0.17
PTPN3P26045 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN3P26045 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN3P26045 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.14■□□□□ 0.17
PTPN3P26045 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PTPN3P26045 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.14■□□□□ 0.17
PTPN3P26045 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
PTPN3P26045 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN3P26045 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.14■□□□□ 0.17
PTPN3P26045 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN3P26045 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN3P26045 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PTPN3P26045 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PTPN3P26045 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN3P26045 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN3P26045 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.13■□□□□ 0.17
PTPN3P26045 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PTPN3P26045 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN3P26045 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN3P26045 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PTPN3P26045 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.13■□□□□ 0.17
PTPN3P26045 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
PTPN3P26045 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN3P26045 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.13■□□□□ 0.17
PTPN3P26045 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.13■□□□□ 0.17
PTPN3P26045 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN3P26045 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN3P26045 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN3P26045 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN3P26045 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN3P26045 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN3P26045 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PTPN3P26045 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.13■□□□□ 0.17
PTPN3P26045 TARDBPP1-201ENST00000442013 1203 ntBASIC16.13■□□□□ 0.17
PTPN3P26045 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.13■□□□□ 0.17
PTPN3P26045 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN3P26045 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.13■□□□□ 0.17
PTPN3P26045 HLA-V-204ENST00000476601 1289 ntBASIC16.13■□□□□ 0.17
PTPN3P26045 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.13■□□□□ 0.17
PTPN3P26045 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN3P26045 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.13■□□□□ 0.17
PTPN3P26045 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.13■□□□□ 0.17
PTPN3P26045 AC015911.4-201ENST00000588022 1070 ntBASIC16.13■□□□□ 0.17
PTPN3P26045 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.13■□□□□ 0.17
PTPN3P26045 AC093028.1-201ENST00000622998 982 ntBASIC16.13■□□□□ 0.17
PTPN3P26045 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.13■□□□□ 0.17
PTPN3P26045 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN3P26045 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN3P26045 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.13■□□□□ 0.17
PTPN3P26045 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN3P26045 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PTPN3P26045 FO538757.1-201ENST00000623083 1397 ntBASIC16.13■□□□□ 0.17
PTPN3P26045 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN3P26045 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.12■□□□□ 0.17
PTPN3P26045 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PTPN3P26045 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN3P26045 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN3P26045 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN3P26045 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.12■□□□□ 0.17
PTPN3P26045 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.12■□□□□ 0.17
PTPN3P26045 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN3P26045 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN3P26045 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN3P26045 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN3P26045 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.12■□□□□ 0.17
PTPN3P26045 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN3P26045 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN3P26045 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN3P26045 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PTPN3P26045 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN3P26045 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PTPN3P26045 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.12■□□□□ 0.17
PTPN3P26045 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN3P26045 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.12■□□□□ 0.17
PTPN3P26045 AC125807.1-201ENST00000483097 614 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms