Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TNFSF4P23510 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TNFSF4P23510 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TNFSF4P23510 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TNFSF4P23510 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TNFSF4P23510 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
TNFSF4P23510 PCDHB19P-201ENST00000570871 2371 ntBASIC13.6□□□□□ -0.23
TNFSF4P23510 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
TNFSF4P23510 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TNFSF4P23510 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TNFSF4P23510 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
TNFSF4P23510 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.6□□□□□ -0.23
TNFSF4P23510 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.6□□□□□ -0.23
TNFSF4P23510 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
TNFSF4P23510 AC087499.5-201ENST00000452760 1342 ntBASIC13.6□□□□□ -0.23
TNFSF4P23510 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.6□□□□□ -0.23
TNFSF4P23510 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.6□□□□□ -0.23
TNFSF4P23510 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
TNFSF4P23510 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.6□□□□□ -0.23
TNFSF4P23510 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TNFSF4P23510 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.6□□□□□ -0.23
TNFSF4P23510 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
TNFSF4P23510 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TNFSF4P23510 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TNFSF4P23510 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TNFSF4P23510 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.59□□□□□ -0.23
TNFSF4P23510 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
TNFSF4P23510 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TNFSF4P23510 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TNFSF4P23510 BNIP3P1-202ENST00000550043 1585 ntBASIC13.59□□□□□ -0.23
TNFSF4P23510 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.59□□□□□ -0.23
TNFSF4P23510 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.59□□□□□ -0.23
TNFSF4P23510 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TNFSF4P23510 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TNFSF4P23510 AC011477.6-201ENST00000604980 1927 ntBASIC13.59□□□□□ -0.23
TNFSF4P23510 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TNFSF4P23510 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TNFSF4P23510 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TNFSF4P23510 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.59□□□□□ -0.23
TNFSF4P23510 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TNFSF4P23510 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TNFSF4P23510 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TNFSF4P23510 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TNFSF4P23510 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.59□□□□□ -0.23
TNFSF4P23510 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TNFSF4P23510 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.59□□□□□ -0.23
TNFSF4P23510 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
TNFSF4P23510 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.59□□□□□ -0.23
TNFSF4P23510 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.59□□□□□ -0.23
TNFSF4P23510 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.59□□□□□ -0.23
TNFSF4P23510 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.59□□□□□ -0.23
TNFSF4P23510 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.59□□□□□ -0.23
TNFSF4P23510 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.59□□□□□ -0.23
TNFSF4P23510 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.59□□□□□ -0.23
TNFSF4P23510 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.59□□□□□ -0.23
TNFSF4P23510 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TNFSF4P23510 AL033527.5-202ENST00000641632 1098 ntBASIC13.59□□□□□ -0.23
TNFSF4P23510 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TNFSF4P23510 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.59□□□□□ -0.23
TNFSF4P23510 TSPY26P-202ENST00000565928 3884 ntBASIC13.59□□□□□ -0.23
TNFSF4P23510 LINC00554-201ENST00000564841 3011 ntBASIC13.59□□□□□ -0.23
TNFSF4P23510 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TNFSF4P23510 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TNFSF4P23510 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.59□□□□□ -0.23
TNFSF4P23510 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TNFSF4P23510 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TNFSF4P23510 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.59□□□□□ -0.23
TNFSF4P23510 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TNFSF4P23510 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TNFSF4P23510 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TNFSF4P23510 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
TNFSF4P23510 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TNFSF4P23510 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TNFSF4P23510 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TNFSF4P23510 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TNFSF4P23510 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TNFSF4P23510 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TNFSF4P23510 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.58□□□□□ -0.23
TNFSF4P23510 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TNFSF4P23510 AC134407.2-201ENST00000625089 1978 ntBASIC13.58□□□□□ -0.24
TNFSF4P23510 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.58□□□□□ -0.24
TNFSF4P23510 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.58□□□□□ -0.24
TNFSF4P23510 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.58□□□□□ -0.24
TNFSF4P23510 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TNFSF4P23510 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TNFSF4P23510 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
TNFSF4P23510 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.58□□□□□ -0.24
TNFSF4P23510 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.58□□□□□ -0.24
TNFSF4P23510 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.58□□□□□ -0.24
TNFSF4P23510 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TNFSF4P23510 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TNFSF4P23510 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TNFSF4P23510 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TNFSF4P23510 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TNFSF4P23510 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TNFSF4P23510 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TNFSF4P23510 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TNFSF4P23510 AC092580.3-201ENST00000430932 139 ntBASIC13.58□□□□□ -0.24
TNFSF4P23510 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.58□□□□□ -0.24
TNFSF4P23510 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms