Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 AC125634.1-201ENST00000438758 1403 ntBASIC12.23□□□□□ -0.45
RAB4AP20338 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RAB4AP20338 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RAB4AP20338 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC12.23□□□□□ -0.45
RAB4AP20338 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB4AP20338 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB4AP20338 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC12.23□□□□□ -0.45
RAB4AP20338 GCSHP5-201ENST00000443090 522 ntBASIC12.23□□□□□ -0.45
RAB4AP20338 AC098590.1-201ENST00000468126 897 ntBASIC12.23□□□□□ -0.45
RAB4AP20338 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC12.23□□□□□ -0.45
RAB4AP20338 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB4AP20338 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC12.23□□□□□ -0.45
RAB4AP20338 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC12.23□□□□□ -0.45
RAB4AP20338 AC140113.3-201ENST00000605663 199 ntBASIC12.23□□□□□ -0.45
RAB4AP20338 AL023973.1-201ENST00000624619 620 ntBASIC12.23□□□□□ -0.45
RAB4AP20338 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.23□□□□□ -0.45
RAB4AP20338 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RAB4AP20338 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC12.23□□□□□ -0.45
RAB4AP20338 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.23□□□□□ -0.45
RAB4AP20338 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.23□□□□□ -0.45
RAB4AP20338 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB4AP20338 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RAB4AP20338 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.23□□□□□ -0.45
RAB4AP20338 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB4AP20338 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
RAB4AP20338 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC12.23□□□□□ -0.45
RAB4AP20338 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
RAB4AP20338 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RAB4AP20338 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB4AP20338 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.23□□□□□ -0.45
RAB4AP20338 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB4AP20338 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
RAB4AP20338 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.23□□□□□ -0.45
RAB4AP20338 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
RAB4AP20338 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RAB4AP20338 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB4AP20338 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC12.22□□□□□ -0.45
RAB4AP20338 GGT3P-204ENST00000453783 1664 ntBASIC12.22□□□□□ -0.45
RAB4AP20338 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
RAB4AP20338 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB4AP20338 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB4AP20338 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB4AP20338 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB4AP20338 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB4AP20338 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB4AP20338 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
RAB4AP20338 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
RAB4AP20338 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB4AP20338 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
RAB4AP20338 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB4AP20338 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB4AP20338 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB4AP20338 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.22□□□□□ -0.45
RAB4AP20338 CICP11-201ENST00000434745 2827 ntBASIC12.22□□□□□ -0.45
RAB4AP20338 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB4AP20338 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
RAB4AP20338 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
RAB4AP20338 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB4AP20338 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB4AP20338 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.22□□□□□ -0.45
RAB4AP20338 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.22□□□□□ -0.45
RAB4AP20338 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB4AP20338 AC003669.1-201ENST00000334569 611 ntBASIC12.22□□□□□ -0.45
RAB4AP20338 FAM220CP-201ENST00000395253 831 ntBASIC12.22□□□□□ -0.45
RAB4AP20338 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB4AP20338 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB4AP20338 AL355075.4-201ENST00000554988 638 ntBASIC12.22□□□□□ -0.45
RAB4AP20338 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
RAB4AP20338 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC12.22□□□□□ -0.45
RAB4AP20338 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC12.22□□□□□ -0.45
RAB4AP20338 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB4AP20338 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
RAB4AP20338 AC005332.3-201ENST00000589904 676 ntBASIC12.22□□□□□ -0.45
RAB4AP20338 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB4AP20338 SNX21-213ENST00000614929 587 ntTSL 5 BASIC12.22□□□□□ -0.45
RAB4AP20338 SPEG-225ENST00000617028 815 ntTSL 5 BASIC12.22□□□□□ -0.45
RAB4AP20338 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
RAB4AP20338 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB4AP20338 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB4AP20338 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
RAB4AP20338 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.22□□□□□ -0.45
RAB4AP20338 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.22□□□□□ -0.45
RAB4AP20338 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB4AP20338 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB4AP20338 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
RAB4AP20338 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
RAB4AP20338 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB4AP20338 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB4AP20338 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB4AP20338 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB4AP20338 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB4AP20338 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB4AP20338 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB4AP20338 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB4AP20338 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.22□□□□□ -0.45
RAB4AP20338 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB4AP20338 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB4AP20338 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB4AP20338 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB4AP20338 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms