Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FREM3P0C091 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.36□□□□□ -0.11
FREM3P0C091 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
FREM3P0C091 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.36□□□□□ -0.11
FREM3P0C091 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FREM3P0C091 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FREM3P0C091 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
FREM3P0C091 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
FREM3P0C091 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
FREM3P0C091 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FREM3P0C091 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
FREM3P0C091 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
FREM3P0C091 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FREM3P0C091 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
FREM3P0C091 CU639417.3-201ENST00000624240 1404 ntBASIC14.36□□□□□ -0.11
FREM3P0C091 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FREM3P0C091 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
FREM3P0C091 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FREM3P0C091 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FREM3P0C091 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.36□□□□□ -0.11
FREM3P0C091 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FREM3P0C091 PPT1-215ENST00000641471 2368 ntBASIC14.36□□□□□ -0.11
FREM3P0C091 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
FREM3P0C091 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
FREM3P0C091 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FREM3P0C091 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.36□□□□□ -0.11
FREM3P0C091 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.36□□□□□ -0.11
FREM3P0C091 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FREM3P0C091 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.36□□□□□ -0.11
FREM3P0C091 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.36□□□□□ -0.11
FREM3P0C091 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.36□□□□□ -0.11
FREM3P0C091 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.36□□□□□ -0.11
FREM3P0C091 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.36□□□□□ -0.11
FREM3P0C091 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.36□□□□□ -0.11
FREM3P0C091 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.36□□□□□ -0.11
FREM3P0C091 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.36□□□□□ -0.11
FREM3P0C091 AC008494.3-201ENST00000606615 944 ntBASIC14.36□□□□□ -0.11
FREM3P0C091 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.36□□□□□ -0.11
FREM3P0C091 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FREM3P0C091 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FREM3P0C091 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FREM3P0C091 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.36□□□□□ -0.11
FREM3P0C091 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FREM3P0C091 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
FREM3P0C091 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
FREM3P0C091 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FREM3P0C091 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
FREM3P0C091 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.36□□□□□ -0.11
FREM3P0C091 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
FREM3P0C091 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
FREM3P0C091 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
FREM3P0C091 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
FREM3P0C091 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FREM3P0C091 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
FREM3P0C091 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FREM3P0C091 FO393414.2-201ENST00000405153 598 ntBASIC14.35□□□□□ -0.11
FREM3P0C091 AP006294.1-201ENST00000415407 339 ntBASIC14.35□□□□□ -0.11
FREM3P0C091 KRT18P64-201ENST00000434946 1219 ntBASIC14.35□□□□□ -0.11
FREM3P0C091 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
FREM3P0C091 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.35□□□□□ -0.11
FREM3P0C091 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.35□□□□□ -0.11
FREM3P0C091 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.35□□□□□ -0.11
FREM3P0C091 TERF1P3-201ENST00000505638 1227 ntBASIC14.35□□□□□ -0.11
FREM3P0C091 AC093004.1-201ENST00000508850 424 ntBASIC14.35□□□□□ -0.11
FREM3P0C091 SDHAP3-202ENST00000515467 728 ntBASIC14.35□□□□□ -0.11
FREM3P0C091 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
FREM3P0C091 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.35□□□□□ -0.11
FREM3P0C091 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
FREM3P0C091 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.35□□□□□ -0.11
FREM3P0C091 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
FREM3P0C091 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.35□□□□□ -0.11
FREM3P0C091 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.35□□□□□ -0.11
FREM3P0C091 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.35□□□□□ -0.11
FREM3P0C091 AC009090.5-201ENST00000624886 2285 ntBASIC14.35□□□□□ -0.11
FREM3P0C091 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
FREM3P0C091 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FREM3P0C091 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.35□□□□□ -0.11
FREM3P0C091 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.35□□□□□ -0.11
FREM3P0C091 DBET-201ENST00000630918 3363 ntBASIC14.35□□□□□ -0.11
FREM3P0C091 AP005117.1-202ENST00000581724 1908 ntBASIC14.35□□□□□ -0.11
FREM3P0C091 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
FREM3P0C091 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
FREM3P0C091 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FREM3P0C091 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FREM3P0C091 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FREM3P0C091 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FREM3P0C091 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FREM3P0C091 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.35□□□□□ -0.11
FREM3P0C091 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
FREM3P0C091 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.35□□□□□ -0.11
FREM3P0C091 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.35□□□□□ -0.11
FREM3P0C091 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.35□□□□□ -0.11
FREM3P0C091 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FREM3P0C091 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
FREM3P0C091 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FREM3P0C091 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FREM3P0C091 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FREM3P0C091 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FREM3P0C091 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.35□□□□□ -0.11
FREM3P0C091 DFFBP1-201ENST00000433250 979 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms