Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
HLA-AP01891 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.45□□□□□ -0.26
HLA-AP01891 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-AP01891 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HLA-AP01891 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-AP01891 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
HLA-AP01891 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-AP01891 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-AP01891 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-AP01891 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-AP01891 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.45□□□□□ -0.26
HLA-AP01891 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-AP01891 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-AP01891 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-AP01891 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-AP01891 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.45□□□□□ -0.26
HLA-AP01891 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-AP01891 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.45□□□□□ -0.26
HLA-AP01891 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-AP01891 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-AP01891 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-AP01891 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.45□□□□□ -0.26
HLA-AP01891 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-AP01891 DUSP5P1-201ENST00000441325 1139 ntBASIC13.45□□□□□ -0.26
HLA-AP01891 ABCD1P5-201ENST00000445663 754 ntBASIC13.45□□□□□ -0.26
HLA-AP01891 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.45□□□□□ -0.26
HLA-AP01891 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.45□□□□□ -0.26
HLA-AP01891 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-AP01891 AL160237.2-201ENST00000556165 472 ntBASIC13.45□□□□□ -0.26
HLA-AP01891 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.45□□□□□ -0.26
HLA-AP01891 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.45□□□□□ -0.26
HLA-AP01891 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
HLA-AP01891 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-AP01891 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
HLA-AP01891 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-AP01891 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-AP01891 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.45□□□□□ -0.26
HLA-AP01891 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-AP01891 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HLA-AP01891 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
HLA-AP01891 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-AP01891 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-AP01891 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-AP01891 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-AP01891 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HLA-AP01891 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.45□□□□□ -0.26
HLA-AP01891 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
HLA-AP01891 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-AP01891 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-AP01891 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-AP01891 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-AP01891 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
HLA-AP01891 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.45□□□□□ -0.26
HLA-AP01891 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-AP01891 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-AP01891 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.44□□□□□ -0.26
HLA-AP01891 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-AP01891 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
HLA-AP01891 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.44□□□□□ -0.26
HLA-AP01891 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.44□□□□□ -0.26
HLA-AP01891 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-AP01891 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.44□□□□□ -0.26
HLA-AP01891 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-AP01891 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.44□□□□□ -0.26
HLA-AP01891 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
HLA-AP01891 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
HLA-AP01891 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-AP01891 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-AP01891 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.44□□□□□ -0.26
HLA-AP01891 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-AP01891 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-AP01891 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
HLA-AP01891 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-AP01891 HCG4-201ENST00000418983 998 ntBASIC13.44□□□□□ -0.26
HLA-AP01891 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.44□□□□□ -0.26
HLA-AP01891 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.44□□□□□ -0.26
HLA-AP01891 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
HLA-AP01891 UNC93B7-201ENST00000509439 705 ntBASIC13.44□□□□□ -0.26
HLA-AP01891 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-AP01891 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.44□□□□□ -0.26
HLA-AP01891 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.44□□□□□ -0.26
HLA-AP01891 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
HLA-AP01891 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.44□□□□□ -0.26
HLA-AP01891 LINC01711-201ENST00000598340 967 ntBASIC13.44□□□□□ -0.26
HLA-AP01891 IFNL4P1-201ENST00000607083 540 ntBASIC13.44□□□□□ -0.26
HLA-AP01891 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-AP01891 AF228730.7-201ENST00000641842 219 ntBASIC13.44□□□□□ -0.26
HLA-AP01891 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-AP01891 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-AP01891 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-AP01891 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-AP01891 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-AP01891 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-AP01891 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-AP01891 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-AP01891 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-AP01891 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.44□□□□□ -0.26
HLA-AP01891 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-AP01891 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-AP01891 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms