Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC12.6□□□□□ -0.39
IFNA1P01562 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
IFNA1P01562 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC12.6□□□□□ -0.39
IFNA1P01562 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC12.6□□□□□ -0.39
IFNA1P01562 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
IFNA1P01562 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IFNA1P01562 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IFNA1P01562 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC12.6□□□□□ -0.39
IFNA1P01562 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC12.6□□□□□ -0.39
IFNA1P01562 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IFNA1P01562 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IFNA1P01562 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
IFNA1P01562 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IFNA1P01562 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IFNA1P01562 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
IFNA1P01562 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
IFNA1P01562 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.6□□□□□ -0.39
IFNA1P01562 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
IFNA1P01562 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IFNA1P01562 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
IFNA1P01562 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
IFNA1P01562 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
IFNA1P01562 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.6□□□□□ -0.39
IFNA1P01562 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
IFNA1P01562 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
IFNA1P01562 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC12.59□□□□□ -0.39
IFNA1P01562 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IFNA1P01562 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IFNA1P01562 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IFNA1P01562 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IFNA1P01562 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.59□□□□□ -0.39
IFNA1P01562 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
IFNA1P01562 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
IFNA1P01562 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
IFNA1P01562 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.59□□□□□ -0.39
IFNA1P01562 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
IFNA1P01562 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
IFNA1P01562 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IFNA1P01562 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
IFNA1P01562 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IFNA1P01562 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
IFNA1P01562 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.59□□□□□ -0.39
IFNA1P01562 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.59□□□□□ -0.39
IFNA1P01562 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IFNA1P01562 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
IFNA1P01562 SLC22A20-204ENST00000530038 1673 ntBASIC12.59□□□□□ -0.39
IFNA1P01562 ARMC10P1-201ENST00000313754 855 ntBASIC12.59□□□□□ -0.39
IFNA1P01562 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IFNA1P01562 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
IFNA1P01562 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
IFNA1P01562 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC12.59□□□□□ -0.39
IFNA1P01562 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IFNA1P01562 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
IFNA1P01562 RNF126P1-202ENST00000569893 925 ntBASIC12.59□□□□□ -0.39
IFNA1P01562 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.59□□□□□ -0.39
IFNA1P01562 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
IFNA1P01562 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC12.59□□□□□ -0.39
IFNA1P01562 FGF14-AS2-201ENST00000606448 1074 ntBASIC12.59□□□□□ -0.39
IFNA1P01562 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IFNA1P01562 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IFNA1P01562 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IFNA1P01562 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IFNA1P01562 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
IFNA1P01562 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
IFNA1P01562 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
IFNA1P01562 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
IFNA1P01562 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
IFNA1P01562 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
IFNA1P01562 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IFNA1P01562 INTS4P1-203ENST00000641008 3683 ntBASIC12.59□□□□□ -0.39
IFNA1P01562 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
IFNA1P01562 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IFNA1P01562 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.59□□□□□ -0.39
IFNA1P01562 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC12.59□□□□□ -0.39
IFNA1P01562 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
IFNA1P01562 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
IFNA1P01562 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.58□□□□□ -0.39
IFNA1P01562 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.39
IFNA1P01562 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.39
IFNA1P01562 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.58□□□□□ -0.39
IFNA1P01562 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
IFNA1P01562 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
IFNA1P01562 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
IFNA1P01562 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
IFNA1P01562 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.39
IFNA1P01562 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
IFNA1P01562 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.58□□□□□ -0.39
IFNA1P01562 GID4-202ENST00000376345 1391 ntTSL 3 BASIC12.58□□□□□ -0.4
IFNA1P01562 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
IFNA1P01562 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
IFNA1P01562 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.58□□□□□ -0.4
IFNA1P01562 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
IFNA1P01562 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
IFNA1P01562 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
IFNA1P01562 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
IFNA1P01562 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
IFNA1P01562 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC12.58□□□□□ -0.4
IFNA1P01562 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
IFNA1P01562 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
IFNA1P01562 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms