Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.27■□□□□ 0.52
CTDNEP1O95476 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.27■□□□□ 0.52
CTDNEP1O95476 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.27■□□□□ 0.52
CTDNEP1O95476 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.27■□□□□ 0.52
CTDNEP1O95476 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.27■□□□□ 0.52
CTDNEP1O95476 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.27■□□□□ 0.52
CTDNEP1O95476 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.27■□□□□ 0.52
CTDNEP1O95476 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTDNEP1O95476 AC023024.2-201ENST00000623561 1993 ntBASIC18.27■□□□□ 0.52
CTDNEP1O95476 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CTDNEP1O95476 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTDNEP1O95476 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.27■□□□□ 0.52
CTDNEP1O95476 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.27■□□□□ 0.52
CTDNEP1O95476 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CTDNEP1O95476 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CTDNEP1O95476 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
CTDNEP1O95476 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.27■□□□□ 0.51
CTDNEP1O95476 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CTDNEP1O95476 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CTDNEP1O95476 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CTDNEP1O95476 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.27■□□□□ 0.51
CTDNEP1O95476 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
CTDNEP1O95476 TCAF2P1-201ENST00000291129 2421 ntBASIC18.27■□□□□ 0.51
CTDNEP1O95476 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTDNEP1O95476 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTDNEP1O95476 TPO-203ENST00000346956 2923 ntTSL 5 BASIC18.26■□□□□ 0.51
CTDNEP1O95476 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTDNEP1O95476 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTDNEP1O95476 KRT18P28-201ENST00000453838 1332 ntBASIC18.26■□□□□ 0.51
CTDNEP1O95476 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
CTDNEP1O95476 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CTDNEP1O95476 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CTDNEP1O95476 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CTDNEP1O95476 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTDNEP1O95476 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CTDNEP1O95476 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CTDNEP1O95476 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.26■□□□□ 0.51
CTDNEP1O95476 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTDNEP1O95476 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CTDNEP1O95476 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.26■□□□□ 0.51
CTDNEP1O95476 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.26■□□□□ 0.51
CTDNEP1O95476 TREML5P-201ENST00000421694 576 ntBASIC18.26■□□□□ 0.51
CTDNEP1O95476 AC107890.1-201ENST00000422478 521 ntBASIC18.26■□□□□ 0.51
CTDNEP1O95476 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CTDNEP1O95476 TSSK5P-201ENST00000423978 907 ntBASIC18.26■□□□□ 0.51
CTDNEP1O95476 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.26■□□□□ 0.51
CTDNEP1O95476 AC069120.2-201ENST00000524091 540 ntBASIC18.26■□□□□ 0.51
CTDNEP1O95476 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.26■□□□□ 0.51
CTDNEP1O95476 DUX4L27-201ENST00000554796 1261 ntBASIC18.26■□□□□ 0.51
CTDNEP1O95476 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CTDNEP1O95476 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTDNEP1O95476 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTDNEP1O95476 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTDNEP1O95476 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CTDNEP1O95476 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTDNEP1O95476 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.26■□□□□ 0.51
CTDNEP1O95476 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTDNEP1O95476 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTDNEP1O95476 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.26■□□□□ 0.51
CTDNEP1O95476 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTDNEP1O95476 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.26■□□□□ 0.51
CTDNEP1O95476 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTDNEP1O95476 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CTDNEP1O95476 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CTDNEP1O95476 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTDNEP1O95476 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CTDNEP1O95476 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CTDNEP1O95476 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CTDNEP1O95476 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTDNEP1O95476 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTDNEP1O95476 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CTDNEP1O95476 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.25■□□□□ 0.51
CTDNEP1O95476 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.25■□□□□ 0.51
CTDNEP1O95476 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CTDNEP1O95476 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CTDNEP1O95476 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTDNEP1O95476 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTDNEP1O95476 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.25■□□□□ 0.51
CTDNEP1O95476 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CTDNEP1O95476 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CTDNEP1O95476 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CTDNEP1O95476 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTDNEP1O95476 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTDNEP1O95476 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CTDNEP1O95476 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTDNEP1O95476 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CTDNEP1O95476 SERBP1P3-201ENST00000459980 809 ntBASIC18.25■□□□□ 0.51
CTDNEP1O95476 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTDNEP1O95476 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.25■□□□□ 0.51
CTDNEP1O95476 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.25■□□□□ 0.51
CTDNEP1O95476 AC027369.6-201ENST00000525520 931 ntBASIC18.25■□□□□ 0.51
CTDNEP1O95476 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CTDNEP1O95476 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.25■□□□□ 0.51
CTDNEP1O95476 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.25■□□□□ 0.51
CTDNEP1O95476 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.25■□□□□ 0.51
CTDNEP1O95476 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.25■□□□□ 0.51
CTDNEP1O95476 AL109936.8-201ENST00000641772 604 ntBASIC18.25■□□□□ 0.51
CTDNEP1O95476 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.25■□□□□ 0.51
CTDNEP1O95476 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.25■□□□□ 0.51
CTDNEP1O95476 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms