Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.82□□□□□ -0.2
UPK1BO75841 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UPK1BO75841 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UPK1BO75841 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.82□□□□□ -0.2
UPK1BO75841 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UPK1BO75841 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
UPK1BO75841 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
UPK1BO75841 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
UPK1BO75841 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
UPK1BO75841 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UPK1BO75841 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.82□□□□□ -0.2
UPK1BO75841 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.82□□□□□ -0.2
UPK1BO75841 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.82□□□□□ -0.2
UPK1BO75841 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UPK1BO75841 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UPK1BO75841 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC13.82□□□□□ -0.2
UPK1BO75841 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.82□□□□□ -0.2
UPK1BO75841 AL645939.2-201ENST00000427340 991 ntBASIC13.82□□□□□ -0.2
UPK1BO75841 ECEL1P3-201ENST00000427961 737 ntBASIC13.82□□□□□ -0.2
UPK1BO75841 PMS2P1-201ENST00000431037 1228 ntBASIC13.82□□□□□ -0.2
UPK1BO75841 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC13.82□□□□□ -0.2
UPK1BO75841 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UPK1BO75841 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.82□□□□□ -0.2
UPK1BO75841 KLF13-207ENST00000560473 489 ntTSL 3 BASIC13.82□□□□□ -0.2
UPK1BO75841 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC13.82□□□□□ -0.2
UPK1BO75841 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.82□□□□□ -0.2
UPK1BO75841 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC13.82□□□□□ -0.2
UPK1BO75841 AL353801.3-201ENST00000609898 542 ntBASIC13.82□□□□□ -0.2
UPK1BO75841 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UPK1BO75841 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UPK1BO75841 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
UPK1BO75841 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
UPK1BO75841 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UPK1BO75841 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
UPK1BO75841 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UPK1BO75841 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UPK1BO75841 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.82□□□□□ -0.2
UPK1BO75841 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UPK1BO75841 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.82□□□□□ -0.2
UPK1BO75841 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UPK1BO75841 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UPK1BO75841 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
UPK1BO75841 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UPK1BO75841 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UPK1BO75841 AC015802.1-201ENST00000588104 1449 ntBASIC13.81□□□□□ -0.2
UPK1BO75841 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1BO75841 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1BO75841 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1BO75841 AP001282.1-201ENST00000531301 1499 ntBASIC13.81□□□□□ -0.2
UPK1BO75841 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1BO75841 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.81□□□□□ -0.2
UPK1BO75841 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.81□□□□□ -0.2
UPK1BO75841 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
UPK1BO75841 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1BO75841 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1BO75841 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1BO75841 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.81□□□□□ -0.2
UPK1BO75841 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.81□□□□□ -0.2
UPK1BO75841 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.81□□□□□ -0.2
UPK1BO75841 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.81□□□□□ -0.2
UPK1BO75841 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1BO75841 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
UPK1BO75841 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1BO75841 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.81□□□□□ -0.2
UPK1BO75841 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
UPK1BO75841 GXYLT1P3-201ENST00000453058 1193 ntBASIC13.81□□□□□ -0.2
UPK1BO75841 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC13.81□□□□□ -0.2
UPK1BO75841 S100A2-206ENST00000497140 697 ntTSL 2 BASIC13.81□□□□□ -0.2
UPK1BO75841 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1BO75841 AL160237.2-201ENST00000556165 472 ntBASIC13.81□□□□□ -0.2
UPK1BO75841 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.81□□□□□ -0.2
UPK1BO75841 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.81□□□□□ -0.2
UPK1BO75841 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
UPK1BO75841 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.81□□□□□ -0.2
UPK1BO75841 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC13.81□□□□□ -0.2
UPK1BO75841 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13.81□□□□□ -0.2
UPK1BO75841 REXO1L3P-201ENST00000622202 1288 ntBASIC13.81□□□□□ -0.2
UPK1BO75841 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.81□□□□□ -0.2
UPK1BO75841 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC13.81□□□□□ -0.2
UPK1BO75841 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
UPK1BO75841 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1BO75841 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1BO75841 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1BO75841 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.81□□□□□ -0.2
UPK1BO75841 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1BO75841 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1BO75841 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1BO75841 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1BO75841 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1BO75841 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
UPK1BO75841 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1BO75841 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1BO75841 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.81□□□□□ -0.2
UPK1BO75841 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1BO75841 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
UPK1BO75841 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC13.8□□□□□ -0.2
UPK1BO75841 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.8□□□□□ -0.2
UPK1BO75841 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms