Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZIC3O60481 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ZIC3O60481 CICP13-201ENST00000422015 2789 ntBASIC14.19□□□□□ -0.14
ZIC3O60481 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZIC3O60481 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZIC3O60481 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
ZIC3O60481 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ZIC3O60481 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZIC3O60481 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.19□□□□□ -0.14
ZIC3O60481 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ZIC3O60481 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZIC3O60481 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ZIC3O60481 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
ZIC3O60481 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
ZIC3O60481 DGCR5-201ENST00000399539 862 ntBASIC14.19□□□□□ -0.14
ZIC3O60481 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.19□□□□□ -0.14
ZIC3O60481 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.19□□□□□ -0.14
ZIC3O60481 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.19□□□□□ -0.14
ZIC3O60481 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.19□□□□□ -0.14
ZIC3O60481 MYCLP2-201ENST00000449268 967 ntBASIC14.19□□□□□ -0.14
ZIC3O60481 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
ZIC3O60481 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.19□□□□□ -0.14
ZIC3O60481 AC123567.1-201ENST00000548294 1261 ntBASIC14.19□□□□□ -0.14
ZIC3O60481 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.19□□□□□ -0.14
ZIC3O60481 AC008494.3-201ENST00000606615 944 ntBASIC14.19□□□□□ -0.14
ZIC3O60481 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ZIC3O60481 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.19□□□□□ -0.14
ZIC3O60481 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ZIC3O60481 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ZIC3O60481 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZIC3O60481 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZIC3O60481 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.19□□□□□ -0.14
ZIC3O60481 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.19□□□□□ -0.14
ZIC3O60481 AL121723.1-201ENST00000445194 1519 ntBASIC14.19□□□□□ -0.14
ZIC3O60481 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.19□□□□□ -0.14
ZIC3O60481 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZIC3O60481 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZIC3O60481 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ZIC3O60481 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.19□□□□□ -0.14
ZIC3O60481 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZIC3O60481 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
ZIC3O60481 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.18□□□□□ -0.14
ZIC3O60481 AC092127.1-201ENST00000567093 3455 ntBASIC14.18□□□□□ -0.14
ZIC3O60481 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.18□□□□□ -0.14
ZIC3O60481 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZIC3O60481 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZIC3O60481 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.18□□□□□ -0.14
ZIC3O60481 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZIC3O60481 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZIC3O60481 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
ZIC3O60481 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZIC3O60481 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZIC3O60481 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZIC3O60481 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZIC3O60481 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.18□□□□□ -0.14
ZIC3O60481 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.18□□□□□ -0.14
ZIC3O60481 TMEM261P1-201ENST00000604899 340 ntBASIC14.18□□□□□ -0.14
ZIC3O60481 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.18□□□□□ -0.14
ZIC3O60481 AC007431.3-201ENST00000623221 587 ntBASIC14.18□□□□□ -0.14
ZIC3O60481 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
ZIC3O60481 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZIC3O60481 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.18□□□□□ -0.14
ZIC3O60481 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ZIC3O60481 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZIC3O60481 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZIC3O60481 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.18□□□□□ -0.14
ZIC3O60481 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.18□□□□□ -0.14
ZIC3O60481 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZIC3O60481 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZIC3O60481 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ZIC3O60481 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZIC3O60481 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
ZIC3O60481 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZIC3O60481 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.18□□□□□ -0.14
ZIC3O60481 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZIC3O60481 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZIC3O60481 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZIC3O60481 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.17□□□□□ -0.14
ZIC3O60481 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZIC3O60481 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZIC3O60481 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZIC3O60481 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZIC3O60481 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZIC3O60481 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.17□□□□□ -0.14
ZIC3O60481 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ZIC3O60481 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZIC3O60481 AL133267.1-201ENST00000398220 340 ntBASIC14.17□□□□□ -0.14
ZIC3O60481 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.17□□□□□ -0.14
ZIC3O60481 KRT18P43-201ENST00000469825 1281 ntBASIC14.17□□□□□ -0.14
ZIC3O60481 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.17□□□□□ -0.14
ZIC3O60481 FAM86LP-201ENST00000478302 853 ntBASIC14.17□□□□□ -0.14
ZIC3O60481 ELK1P1-201ENST00000485699 580 ntBASIC14.17□□□□□ -0.14
ZIC3O60481 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.17□□□□□ -0.14
ZIC3O60481 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.17□□□□□ -0.14
ZIC3O60481 AL596325.1-201ENST00000563991 1082 ntBASIC14.17□□□□□ -0.14
ZIC3O60481 AC036164.1-201ENST00000570544 333 ntBASIC14.17□□□□□ -0.14
ZIC3O60481 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZIC3O60481 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.17□□□□□ -0.14
ZIC3O60481 CTBP2P3-201ENST00000585629 1255 ntBASIC14.17□□□□□ -0.14
ZIC3O60481 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms