Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RIPK2O43353 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RIPK2O43353 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RIPK2O43353 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RIPK2O43353 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RIPK2O43353 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RIPK2O43353 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RIPK2O43353 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.11■□□□□ 0.17
RIPK2O43353 PKD1P5-201ENST00000532415 10291 ntBASIC16.11■□□□□ 0.17
RIPK2O43353 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RIPK2O43353 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RIPK2O43353 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RIPK2O43353 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RIPK2O43353 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RIPK2O43353 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RIPK2O43353 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RIPK2O43353 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RIPK2O43353 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RIPK2O43353 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RIPK2O43353 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RIPK2O43353 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RIPK2O43353 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RIPK2O43353 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RIPK2O43353 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.1■□□□□ 0.17
RIPK2O43353 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RIPK2O43353 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RIPK2O43353 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RIPK2O43353 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RIPK2O43353 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.1■□□□□ 0.17
RIPK2O43353 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RIPK2O43353 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RIPK2O43353 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RIPK2O43353 RPS2P28-201ENST00000314255 741 ntBASIC16.1■□□□□ 0.17
RIPK2O43353 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RIPK2O43353 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RIPK2O43353 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RIPK2O43353 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
RIPK2O43353 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.1■□□□□ 0.17
RIPK2O43353 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.1■□□□□ 0.17
RIPK2O43353 UPK3BP1-201ENST00000428678 509 ntBASIC16.1■□□□□ 0.17
RIPK2O43353 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.1■□□□□ 0.17
RIPK2O43353 HCG4B-203ENST00000450128 991 ntBASIC16.1■□□□□ 0.17
RIPK2O43353 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RIPK2O43353 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.1■□□□□ 0.17
RIPK2O43353 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.1■□□□□ 0.17
RIPK2O43353 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.1■□□□□ 0.17
RIPK2O43353 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.1■□□□□ 0.17
RIPK2O43353 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.1■□□□□ 0.17
RIPK2O43353 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RIPK2O43353 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.1■□□□□ 0.17
RIPK2O43353 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RIPK2O43353 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RIPK2O43353 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RIPK2O43353 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.1■□□□□ 0.17
RIPK2O43353 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.1■□□□□ 0.17
RIPK2O43353 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RIPK2O43353 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RIPK2O43353 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RIPK2O43353 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RIPK2O43353 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.1■□□□□ 0.17
RIPK2O43353 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RIPK2O43353 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RIPK2O43353 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.1■□□□□ 0.17
RIPK2O43353 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RIPK2O43353 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.1■□□□□ 0.17
RIPK2O43353 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RIPK2O43353 CICP14-201ENST00000629111 2732 ntBASIC16.1■□□□□ 0.17
RIPK2O43353 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.1■□□□□ 0.17
RIPK2O43353 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RIPK2O43353 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.09■□□□□ 0.17
RIPK2O43353 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RIPK2O43353 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
RIPK2O43353 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RIPK2O43353 AC068587.6-202ENST00000641839 5619 ntBASIC16.09■□□□□ 0.17
RIPK2O43353 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RIPK2O43353 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RIPK2O43353 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.09■□□□□ 0.17
RIPK2O43353 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RIPK2O43353 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RIPK2O43353 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RIPK2O43353 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.09■□□□□ 0.17
RIPK2O43353 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RIPK2O43353 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RIPK2O43353 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RIPK2O43353 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.09■□□□□ 0.17
RIPK2O43353 AC004987.2-201ENST00000395959 1148 ntBASIC16.09■□□□□ 0.17
RIPK2O43353 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.09■□□□□ 0.17
RIPK2O43353 AC092910.1-201ENST00000482027 1129 ntBASIC16.09■□□□□ 0.17
RIPK2O43353 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.09■□□□□ 0.17
RIPK2O43353 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.09■□□□□ 0.17
RIPK2O43353 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.09■□□□□ 0.17
RIPK2O43353 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.09■□□□□ 0.17
RIPK2O43353 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
RIPK2O43353 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RIPK2O43353 FAM215A-202ENST00000632077 792 ntBASIC16.09■□□□□ 0.17
RIPK2O43353 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RIPK2O43353 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.09■□□□□ 0.17
RIPK2O43353 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RIPK2O43353 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.09■□□□□ 0.17
RIPK2O43353 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms