Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX39AO00148 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDX39AO00148 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
DDX39AO00148 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
DDX39AO00148 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX39AO00148 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DDX39AO00148 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX39AO00148 AL391825.1-201ENST00000457671 1364 ntBASIC17.79■□□□□ 0.44
DDX39AO00148 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DDX39AO00148 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX39AO00148 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
DDX39AO00148 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX39AO00148 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
DDX39AO00148 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DDX39AO00148 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
DDX39AO00148 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX39AO00148 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DDX39AO00148 FLJ16779-201ENST00000612722 7638 ntBASIC17.79■□□□□ 0.44
DDX39AO00148 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX39AO00148 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.79■□□□□ 0.44
DDX39AO00148 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX39AO00148 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.79■□□□□ 0.44
DDX39AO00148 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX39AO00148 MYCLP2-201ENST00000449268 967 ntBASIC17.79■□□□□ 0.44
DDX39AO00148 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX39AO00148 SLED1-202ENST00000512051 380 ntBASIC17.79■□□□□ 0.44
DDX39AO00148 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
DDX39AO00148 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.79■□□□□ 0.44
DDX39AO00148 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.79■□□□□ 0.44
DDX39AO00148 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX39AO00148 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX39AO00148 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX39AO00148 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX39AO00148 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX39AO00148 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX39AO00148 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX39AO00148 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
DDX39AO00148 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX39AO00148 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
DDX39AO00148 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX39AO00148 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX39AO00148 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
DDX39AO00148 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
DDX39AO00148 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX39AO00148 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX39AO00148 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
DDX39AO00148 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX39AO00148 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX39AO00148 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX39AO00148 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX39AO00148 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX39AO00148 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.78■□□□□ 0.44
DDX39AO00148 CLK3P2-201ENST00000427566 1453 ntBASIC17.78■□□□□ 0.44
DDX39AO00148 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX39AO00148 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX39AO00148 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX39AO00148 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.78■□□□□ 0.44
DDX39AO00148 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX39AO00148 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX39AO00148 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX39AO00148 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.78■□□□□ 0.44
DDX39AO00148 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.78■□□□□ 0.44
DDX39AO00148 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.78■□□□□ 0.44
DDX39AO00148 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
DDX39AO00148 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.78■□□□□ 0.44
DDX39AO00148 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.78■□□□□ 0.44
DDX39AO00148 MIR4313-201ENST00000580760 101 ntBASIC17.78■□□□□ 0.44
DDX39AO00148 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
DDX39AO00148 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX39AO00148 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.78■□□□□ 0.44
DDX39AO00148 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX39AO00148 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
DDX39AO00148 AL139384.1-201ENST00000612143 3047 ntBASIC17.78■□□□□ 0.44
DDX39AO00148 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DDX39AO00148 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX39AO00148 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX39AO00148 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX39AO00148 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX39AO00148 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
DDX39AO00148 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX39AO00148 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX39AO00148 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX39AO00148 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
DDX39AO00148 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DDX39AO00148 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX39AO00148 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX39AO00148 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.77■□□□□ 0.44
DDX39AO00148 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
DDX39AO00148 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX39AO00148 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.77■□□□□ 0.44
DDX39AO00148 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX39AO00148 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX39AO00148 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX39AO00148 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX39AO00148 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.77■□□□□ 0.44
DDX39AO00148 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.77■□□□□ 0.44
DDX39AO00148 MEP1AP4-201ENST00000423244 1087 ntBASIC17.77■□□□□ 0.44
DDX39AO00148 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.77■□□□□ 0.44
DDX39AO00148 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
DDX39AO00148 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms