Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
NPIPA3F8WFD2 AL391825.1-201ENST00000457671 1364 ntBASIC14.46□□□□□ -0.1
NPIPA3F8WFD2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NPIPA3F8WFD2 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
NPIPA3F8WFD2 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 AL391005.1-201ENST00000623953 2435 ntBASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 DGCR5-201ENST00000399539 862 ntBASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 CHCHD2P3-201ENST00000603038 451 ntBASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
NPIPA3F8WFD2 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 AC026691.1-201ENST00000602502 2017 ntBASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 AC098614.1-201ENST00000368528 745 ntBASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 AC008494.3-201ENST00000606615 944 ntBASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 AC007431.3-201ENST00000623221 587 ntBASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.44□□□□□ -0.1
NPIPA3F8WFD2 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms