Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
COLCA2A8K830 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
COLCA2A8K830 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
COLCA2A8K830 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
COLCA2A8K830 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.13□□□□□ -0.47
COLCA2A8K830 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.13□□□□□ -0.47
COLCA2A8K830 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
COLCA2A8K830 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
COLCA2A8K830 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
COLCA2A8K830 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
COLCA2A8K830 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
COLCA2A8K830 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.13□□□□□ -0.47
COLCA2A8K830 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
COLCA2A8K830 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.12□□□□□ -0.47
COLCA2A8K830 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
COLCA2A8K830 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.12□□□□□ -0.47
COLCA2A8K830 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.12□□□□□ -0.47
COLCA2A8K830 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
COLCA2A8K830 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
COLCA2A8K830 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.12□□□□□ -0.47
COLCA2A8K830 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
COLCA2A8K830 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
COLCA2A8K830 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.12□□□□□ -0.47
COLCA2A8K830 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
COLCA2A8K830 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
COLCA2A8K830 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
COLCA2A8K830 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.12□□□□□ -0.47
COLCA2A8K830 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC12.12□□□□□ -0.47
COLCA2A8K830 AC006015.1-201ENST00000429970 570 ntBASIC12.12□□□□□ -0.47
COLCA2A8K830 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC12.12□□□□□ -0.47
COLCA2A8K830 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC12.12□□□□□ -0.47
COLCA2A8K830 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
COLCA2A8K830 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC12.12□□□□□ -0.47
COLCA2A8K830 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC12.12□□□□□ -0.47
COLCA2A8K830 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
COLCA2A8K830 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC12.12□□□□□ -0.47
COLCA2A8K830 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 ABBA01031661.1-201ENST00000634362 1253 ntBASIC12.12□□□□□ -0.47
COLCA2A8K830 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.12□□□□□ -0.47
COLCA2A8K830 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
COLCA2A8K830 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
COLCA2A8K830 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
COLCA2A8K830 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.12□□□□□ -0.47
COLCA2A8K830 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
COLCA2A8K830 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
COLCA2A8K830 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
COLCA2A8K830 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
COLCA2A8K830 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12.11□□□□□ -0.47
COLCA2A8K830 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
COLCA2A8K830 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
COLCA2A8K830 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
COLCA2A8K830 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
COLCA2A8K830 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.11□□□□□ -0.47
COLCA2A8K830 CICP1-201ENST00000416803 2410 ntBASIC12.11□□□□□ -0.47
COLCA2A8K830 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
COLCA2A8K830 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
COLCA2A8K830 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
COLCA2A8K830 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
COLCA2A8K830 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
COLCA2A8K830 DMBT1P1-203ENST00000636837 4628 ntBASIC12.11□□□□□ -0.47
COLCA2A8K830 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
COLCA2A8K830 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
COLCA2A8K830 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
COLCA2A8K830 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
COLCA2A8K830 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
COLCA2A8K830 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
COLCA2A8K830 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC12.11□□□□□ -0.47
COLCA2A8K830 U82695.1-201ENST00000635752 1889 ntBASIC12.11□□□□□ -0.47
COLCA2A8K830 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms