Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 AC068587.6-202ENST00000641839 5619 ntBASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 RPSAP43-201ENST00000402237 625 ntBASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 AC004461.1-201ENST00000412461 403 ntBASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 ALG1L8P-201ENST00000533887 760 ntBASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 AC010327.4-202ENST00000591484 748 ntBASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 AL136982.4-201ENST00000437689 1740 ntBASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 AC067930.6-201ENST00000623257 4947 ntBASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 REXO1L1P-202ENST00000608646 1974 ntBASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGA11Q9Y5H2 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 AL627223.1-201ENST00000416693 442 ntBASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 AC090142.2-201ENST00000483263 416 ntBASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 AC004835.2-201ENST00000603762 682 ntBASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms