Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 ACA64.2-201ENST00000459014 129 ntBASIC18.29■□□□□ 0.52
CTDP1Q9Y5B0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.29■□□□□ 0.52
CTDP1Q9Y5B0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.29■□□□□ 0.52
CTDP1Q9Y5B0 FAM86LP-201ENST00000478302 853 ntBASIC18.29■□□□□ 0.52
CTDP1Q9Y5B0 SLED1-202ENST00000512051 380 ntBASIC18.29■□□□□ 0.52
CTDP1Q9Y5B0 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.29■□□□□ 0.52
CTDP1Q9Y5B0 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.29■□□□□ 0.52
CTDP1Q9Y5B0 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CTDP1Q9Y5B0 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTDP1Q9Y5B0 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTDP1Q9Y5B0 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTDP1Q9Y5B0 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTDP1Q9Y5B0 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTDP1Q9Y5B0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.29■□□□□ 0.52
CTDP1Q9Y5B0 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
CTDP1Q9Y5B0 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CTDP1Q9Y5B0 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CTDP1Q9Y5B0 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
CTDP1Q9Y5B0 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTDP1Q9Y5B0 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 MIR648-201ENST00000385046 94 ntBASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 AC112492.5-201ENST00000421897 457 ntBASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 AC007274.1-201ENST00000439805 662 ntBASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 AC106886.1-201ENST00000568660 600 ntBASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 AC015936.2-201ENST00000593177 259 ntBASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 KRT8P22-201ENST00000562317 1415 ntBASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 NORAD-201ENST00000565493 5339 ntBASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 AC011270.2-201ENST00000624293 2550 ntBASIC18.28■□□□□ 0.52
CTDP1Q9Y5B0 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 AC074338.1-201ENST00000416825 156 ntBASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 AL162726.2-201ENST00000438986 1017 ntBASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 RPL13AP25-201ENST00000484130 612 ntBASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 MIR6805-201ENST00000615055 62 ntBASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.27■□□□□ 0.52
CTDP1Q9Y5B0 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CTDP1Q9Y5B0 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CTDP1Q9Y5B0 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CTDP1Q9Y5B0 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms