Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC11.09□□□□□ -0.63
UBE2D4Q9Y2X8 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC11.09□□□□□ -0.63
UBE2D4Q9Y2X8 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2D4Q9Y2X8 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2D4Q9Y2X8 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2D4Q9Y2X8 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2D4Q9Y2X8 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2D4Q9Y2X8 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2D4Q9Y2X8 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2D4Q9Y2X8 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2D4Q9Y2X8 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
UBE2D4Q9Y2X8 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 ZEB1-AS1-208ENST00000607166 2503 ntBASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 AL390755.1-201ENST00000623716 2027 ntBASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 SNX18-202ENST00000343017 3140 ntBASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 MED22-202ENST00000371999 987 ntTSL 3 BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 TBCB-205ENST00000585746 875 ntTSL 3 BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 TP73-AS1-207ENST00000624167 988 ntBASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 AC117500.6-201ENST00000624871 588 ntBASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 TK2-221ENST00000620035 5060 ntTSL 2 BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 AC232323.1-201ENST00000540724 2099 ntBASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 REXO1L5P-201ENST00000622260 2098 ntBASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 ZBTB45P2-201ENST00000452245 1531 ntBASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 STK33-217ENST00000534493 1895 ntTSL 2 BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 AC018892.3-201ENST00000623986 2499 ntBASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC11.08□□□□□ -0.64
UBE2D4Q9Y2X8 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 HNRNPDP1-201ENST00000439535 754 ntBASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 AC018712.1-201ENST00000455767 687 ntBASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 AC108751.1-201ENST00000490852 363 ntBASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms