Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
POLR1DQ9Y2S0 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
POLR1DQ9Y2S0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
POLR1DQ9Y2S0 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
POLR1DQ9Y2S0 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
POLR1DQ9Y2S0 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.24□□□□□ -0.13
POLR1DQ9Y2S0 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
POLR1DQ9Y2S0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.24□□□□□ -0.13
POLR1DQ9Y2S0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 AC026120.1-201ENST00000611536 926 ntBASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
POLR1DQ9Y2S0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 AC134407.2-201ENST00000625089 1978 ntBASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 UXT-AS1-201ENST00000590504 1525 ntBASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
POLR1DQ9Y2S0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms