Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SHANK2Q9UPX8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SHANK2Q9UPX8 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SHANK2Q9UPX8 AC018735.1-201ENST00000437208 1502 ntBASIC23.08■■□□□ 1.29
SHANK2Q9UPX8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SHANK2Q9UPX8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.29
SHANK2Q9UPX8 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
SHANK2Q9UPX8 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC23.08■■□□□ 1.29
SHANK2Q9UPX8 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
SHANK2Q9UPX8 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC23.08■■□□□ 1.29
SHANK2Q9UPX8 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SHANK2Q9UPX8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
SHANK2Q9UPX8 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC23.08■■□□□ 1.29
SHANK2Q9UPX8 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SHANK2Q9UPX8 AC091271.1-201ENST00000611877 1162 ntBASIC23.08■■□□□ 1.29
SHANK2Q9UPX8 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC23.08■■□□□ 1.29
SHANK2Q9UPX8 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SHANK2Q9UPX8 AL023775.1-201ENST00000454907 1746 ntBASIC23.08■■□□□ 1.28
SHANK2Q9UPX8 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SHANK2Q9UPX8 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
SHANK2Q9UPX8 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC23.08■■□□□ 1.28
SHANK2Q9UPX8 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC23.07■■□□□ 1.28
SHANK2Q9UPX8 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SHANK2Q9UPX8 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC23.07■■□□□ 1.28
SHANK2Q9UPX8 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
SHANK2Q9UPX8 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SHANK2Q9UPX8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SHANK2Q9UPX8 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SHANK2Q9UPX8 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
SHANK2Q9UPX8 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SHANK2Q9UPX8 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SHANK2Q9UPX8 GGCT-203ENST00000409144 836 ntTSL 2 BASIC23.07■■□□□ 1.28
SHANK2Q9UPX8 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC23.07■■□□□ 1.28
SHANK2Q9UPX8 AC079178.1-201ENST00000420915 656 ntBASIC23.07■■□□□ 1.28
SHANK2Q9UPX8 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC23.07■■□□□ 1.28
SHANK2Q9UPX8 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SHANK2Q9UPX8 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SHANK2Q9UPX8 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC23.07■■□□□ 1.28
SHANK2Q9UPX8 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SHANK2Q9UPX8 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC23.07■■□□□ 1.28
SHANK2Q9UPX8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC23.07■■□□□ 1.28
SHANK2Q9UPX8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
SHANK2Q9UPX8 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
SHANK2Q9UPX8 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SHANK2Q9UPX8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC23.07■■□□□ 1.28
SHANK2Q9UPX8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SHANK2Q9UPX8 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SHANK2Q9UPX8 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC23.07■■□□□ 1.28
SHANK2Q9UPX8 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SHANK2Q9UPX8 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SHANK2Q9UPX8 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SHANK2Q9UPX8 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC23.06■■□□□ 1.28
SHANK2Q9UPX8 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
SHANK2Q9UPX8 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC23.06■■□□□ 1.28
SHANK2Q9UPX8 RPS15-201ENST00000233609 534 ntTSL 2 BASIC23.06■■□□□ 1.28
SHANK2Q9UPX8 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SHANK2Q9UPX8 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC23.06■■□□□ 1.28
SHANK2Q9UPX8 RPL5P21-201ENST00000404620 815 ntBASIC23.06■■□□□ 1.28
SHANK2Q9UPX8 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC23.06■■□□□ 1.28
SHANK2Q9UPX8 HOMER2P2-201ENST00000451621 847 ntBASIC23.06■■□□□ 1.28
SHANK2Q9UPX8 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SHANK2Q9UPX8 RPS15-205ENST00000586686 562 ntTSL 5 BASIC23.06■■□□□ 1.28
SHANK2Q9UPX8 RPS15-208ENST00000591804 711 ntTSL 5 BASIC23.06■■□□□ 1.28
SHANK2Q9UPX8 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SHANK2Q9UPX8 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SHANK2Q9UPX8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SHANK2Q9UPX8 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC23.06■■□□□ 1.28
SHANK2Q9UPX8 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SHANK2Q9UPX8 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC23.06■■□□□ 1.28
SHANK2Q9UPX8 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC23.06■■□□□ 1.28
SHANK2Q9UPX8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SHANK2Q9UPX8 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC23.06■■□□□ 1.28
SHANK2Q9UPX8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SHANK2Q9UPX8 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
SHANK2Q9UPX8 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
SHANK2Q9UPX8 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHANK2Q9UPX8 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC23.05■■□□□ 1.28
SHANK2Q9UPX8 AC015818.8-201ENST00000587907 1519 ntBASIC23.05■■□□□ 1.28
SHANK2Q9UPX8 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHANK2Q9UPX8 AC253536.4-201ENST00000440539 267 ntBASIC23.05■■□□□ 1.28
SHANK2Q9UPX8 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC23.05■■□□□ 1.28
SHANK2Q9UPX8 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC23.05■■□□□ 1.28
SHANK2Q9UPX8 NEU3-202ENST00000526068 431 ntTSL 2 BASIC23.05■■□□□ 1.28
SHANK2Q9UPX8 ACTG1P17-201ENST00000558391 1119 ntBASIC23.05■■□□□ 1.28
SHANK2Q9UPX8 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC23.05■■□□□ 1.28
SHANK2Q9UPX8 U62317.3-201ENST00000608319 855 ntBASIC23.05■■□□□ 1.28
SHANK2Q9UPX8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHANK2Q9UPX8 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
SHANK2Q9UPX8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SHANK2Q9UPX8 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SHANK2Q9UPX8 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHANK2Q9UPX8 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
SHANK2Q9UPX8 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SHANK2Q9UPX8 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
SHANK2Q9UPX8 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
SHANK2Q9UPX8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC23.05■■□□□ 1.28
SHANK2Q9UPX8 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHANK2Q9UPX8 LRRC59-203ENST00000576448 1531 ntBASIC23.05■■□□□ 1.28
SHANK2Q9UPX8 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
SHANK2Q9UPX8 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms