Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC24.28■■□□□ 1.48
RIMBP3Q9UFD9 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RIMBP3Q9UFD9 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC24.28■■□□□ 1.48
RIMBP3Q9UFD9 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RIMBP3Q9UFD9 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RIMBP3Q9UFD9 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
RIMBP3Q9UFD9 DPY19L2P5-201ENST00000456300 331 ntBASIC24.28■■□□□ 1.48
RIMBP3Q9UFD9 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC24.28■■□□□ 1.48
RIMBP3Q9UFD9 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC24.28■■□□□ 1.48
RIMBP3Q9UFD9 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RIMBP3Q9UFD9 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC24.28■■□□□ 1.48
RIMBP3Q9UFD9 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
RIMBP3Q9UFD9 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC24.28■■□□□ 1.48
RIMBP3Q9UFD9 AMT-239ENST00000636865 1914 ntTSL 5 BASIC24.27■■□□□ 1.48
RIMBP3Q9UFD9 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RIMBP3Q9UFD9 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC24.27■■□□□ 1.48
RIMBP3Q9UFD9 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC24.27■■□□□ 1.48
RIMBP3Q9UFD9 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC24.27■■□□□ 1.48
RIMBP3Q9UFD9 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
RIMBP3Q9UFD9 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC24.27■■□□□ 1.48
RIMBP3Q9UFD9 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
RIMBP3Q9UFD9 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
RIMBP3Q9UFD9 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RIMBP3Q9UFD9 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC24.27■■□□□ 1.48
RIMBP3Q9UFD9 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC24.27■■□□□ 1.48
RIMBP3Q9UFD9 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RIMBP3Q9UFD9 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC24.27■■□□□ 1.48
RIMBP3Q9UFD9 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
RIMBP3Q9UFD9 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC24.27■■□□□ 1.48
RIMBP3Q9UFD9 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC24.27■■□□□ 1.48
RIMBP3Q9UFD9 AC010632.2-201ENST00000588369 1224 ntBASIC24.27■■□□□ 1.48
RIMBP3Q9UFD9 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC24.27■■□□□ 1.48
RIMBP3Q9UFD9 AC004466.2-201ENST00000614749 516 ntBASIC24.27■■□□□ 1.48
RIMBP3Q9UFD9 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RIMBP3Q9UFD9 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC24.27■■□□□ 1.47
RIMBP3Q9UFD9 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC24.27■■□□□ 1.47
RIMBP3Q9UFD9 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
RIMBP3Q9UFD9 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RIMBP3Q9UFD9 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
RIMBP3Q9UFD9 LINC01165-201ENST00000445190 1623 ntBASIC24.26■■□□□ 1.47
RIMBP3Q9UFD9 TNXA-203ENST00000507684 2038 ntBASIC24.26■■□□□ 1.47
RIMBP3Q9UFD9 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RIMBP3Q9UFD9 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RIMBP3Q9UFD9 RPS23-204ENST00000507980 836 ntTSL 2 BASIC24.26■■□□□ 1.47
RIMBP3Q9UFD9 AC110057.1-201ENST00000636031 898 ntBASIC24.26■■□□□ 1.47
RIMBP3Q9UFD9 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RIMBP3Q9UFD9 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
RIMBP3Q9UFD9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RIMBP3Q9UFD9 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RIMBP3Q9UFD9 WASH7P-201ENST00000488147 1351 ntBASIC24.26■■□□□ 1.47
RIMBP3Q9UFD9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RIMBP3Q9UFD9 MBP-201ENST00000354542 575 ntTSL 2 BASIC24.25■■□□□ 1.47
RIMBP3Q9UFD9 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
RIMBP3Q9UFD9 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RIMBP3Q9UFD9 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
RIMBP3Q9UFD9 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC24.25■■□□□ 1.47
RIMBP3Q9UFD9 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RIMBP3Q9UFD9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
RIMBP3Q9UFD9 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RIMBP3Q9UFD9 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RIMBP3Q9UFD9 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RIMBP3Q9UFD9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC24.25■■□□□ 1.47
RIMBP3Q9UFD9 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RIMBP3Q9UFD9 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC24.24■■□□□ 1.47
RIMBP3Q9UFD9 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC24.24■■□□□ 1.47
RIMBP3Q9UFD9 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC24.24■■□□□ 1.47
RIMBP3Q9UFD9 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC24.24■■□□□ 1.47
RIMBP3Q9UFD9 MT3-203ENST00000565838 421 ntTSL 3 BASIC24.24■■□□□ 1.47
RIMBP3Q9UFD9 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC24.24■■□□□ 1.47
RIMBP3Q9UFD9 AP005264.6-204ENST00000588436 719 ntBASIC24.24■■□□□ 1.47
RIMBP3Q9UFD9 AC002044.2-201ENST00000624910 970 ntBASIC24.24■■□□□ 1.47
RIMBP3Q9UFD9 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC24.24■■□□□ 1.47
RIMBP3Q9UFD9 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RIMBP3Q9UFD9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
RIMBP3Q9UFD9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC24.24■■□□□ 1.47
RIMBP3Q9UFD9 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RIMBP3Q9UFD9 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
RIMBP3Q9UFD9 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RIMBP3Q9UFD9 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RIMBP3Q9UFD9 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC24.24■■□□□ 1.47
RIMBP3Q9UFD9 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC24.24■■□□□ 1.47
RIMBP3Q9UFD9 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC24.24■■□□□ 1.47
RIMBP3Q9UFD9 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
RIMBP3Q9UFD9 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC24.24■■□□□ 1.47
RIMBP3Q9UFD9 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RIMBP3Q9UFD9 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RIMBP3Q9UFD9 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RIMBP3Q9UFD9 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC24.24■■□□□ 1.47
RIMBP3Q9UFD9 PSME2-217ENST00000615264 874 ntTSL 5 BASIC24.24■■□□□ 1.47
RIMBP3Q9UFD9 PSME2-218ENST00000630027 185 ntTSL 3 BASIC24.24■■□□□ 1.47
RIMBP3Q9UFD9 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC24.24■■□□□ 1.47
RIMBP3Q9UFD9 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
RIMBP3Q9UFD9 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
RIMBP3Q9UFD9 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC24.23■■□□□ 1.47
RIMBP3Q9UFD9 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
RIMBP3Q9UFD9 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
RIMBP3Q9UFD9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RIMBP3Q9UFD9 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RIMBP3Q9UFD9 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
RIMBP3Q9UFD9 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms