Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 GPR182-203ENST00000622922 591 ntBASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 AL596087.1-201ENST00000400979 1969 ntBASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC10Q9NYD6 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.98■□□□□ 0.47
HOXC10Q9NYD6 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC10Q9NYD6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC10Q9NYD6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC10Q9NYD6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC10Q9NYD6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HOXC10Q9NYD6 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HOXC10Q9NYD6 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC10Q9NYD6 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC10Q9NYD6 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.98■□□□□ 0.47
HOXC10Q9NYD6 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.98■□□□□ 0.47
HOXC10Q9NYD6 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.98■□□□□ 0.47
HOXC10Q9NYD6 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HOXC10Q9NYD6 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.98■□□□□ 0.47
HOXC10Q9NYD6 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.98■□□□□ 0.47
HOXC10Q9NYD6 KRT8P44-201ENST00000441609 1350 ntBASIC17.98■□□□□ 0.47
HOXC10Q9NYD6 AC020907.1-201ENST00000616460 1350 ntBASIC17.98■□□□□ 0.47
HOXC10Q9NYD6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC10Q9NYD6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC10Q9NYD6 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC10Q9NYD6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
HOXC10Q9NYD6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC10Q9NYD6 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.98■□□□□ 0.47
HOXC10Q9NYD6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.98■□□□□ 0.47
HOXC10Q9NYD6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC10Q9NYD6 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 AL133338.1-201ENST00000565695 1517 ntBASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
HOXC10Q9NYD6 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.96■□□□□ 0.47
HOXC10Q9NYD6 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXC10Q9NYD6 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms