Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 MTHFR-217ENST00000641820 1569 ntBASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 ALOX12P2-203ENST00000570921 1945 ntBASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 AC105917.1-201ENST00000506637 2539 ntBASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 AL365203.3-201ENST00000609742 2057 ntBASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 AC234783.1-201ENST00000441761 496 ntBASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 AC092552.1-201ENST00000547243 906 ntBASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 Z97205.2-201ENST00000564697 1639 ntBASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 LINC00554-201ENST00000564841 3011 ntBASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.85■□□□□ 0.13
TM9SF3Q9HD45 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 AC008735.3-201ENST00000596646 500 ntBASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 LINC01115-203ENST00000606068 577 ntBASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TM9SF3Q9HD45 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms