Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD248Q9HCU0 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD248Q9HCU0 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD248Q9HCU0 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
CD248Q9HCU0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD248Q9HCU0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.75■□□□□ 0.27
CD248Q9HCU0 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CD248Q9HCU0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.75■□□□□ 0.27
CD248Q9HCU0 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.75■□□□□ 0.27
CD248Q9HCU0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.75■□□□□ 0.27
CD248Q9HCU0 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.75■□□□□ 0.27
CD248Q9HCU0 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.75■□□□□ 0.27
CD248Q9HCU0 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.75■□□□□ 0.27
CD248Q9HCU0 AC007967.4-201ENST00000614700 386 ntBASIC16.75■□□□□ 0.27
CD248Q9HCU0 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.75■□□□□ 0.27
CD248Q9HCU0 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD248Q9HCU0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD248Q9HCU0 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CD248Q9HCU0 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CD248Q9HCU0 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD248Q9HCU0 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CD248Q9HCU0 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CD248Q9HCU0 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD248Q9HCU0 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD248Q9HCU0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CD248Q9HCU0 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CD248Q9HCU0 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.75■□□□□ 0.27
CD248Q9HCU0 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD248Q9HCU0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CD248Q9HCU0 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD248Q9HCU0 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
CD248Q9HCU0 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD248Q9HCU0 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
CD248Q9HCU0 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
CD248Q9HCU0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD248Q9HCU0 SNX33P1-201ENST00000592116 1762 ntBASIC16.74■□□□□ 0.27
CD248Q9HCU0 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD248Q9HCU0 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD248Q9HCU0 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD248Q9HCU0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.74■□□□□ 0.27
CD248Q9HCU0 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD248Q9HCU0 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CD248Q9HCU0 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD248Q9HCU0 AC100757.3-201ENST00000622361 1406 ntBASIC16.74■□□□□ 0.27
CD248Q9HCU0 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD248Q9HCU0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD248Q9HCU0 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD248Q9HCU0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.74■□□□□ 0.27
CD248Q9HCU0 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD248Q9HCU0 AC241585.1-201ENST00000433527 519 ntBASIC16.74■□□□□ 0.27
CD248Q9HCU0 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CD248Q9HCU0 KRT18P34-201ENST00000488218 1270 ntBASIC16.74■□□□□ 0.27
CD248Q9HCU0 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.74■□□□□ 0.27
CD248Q9HCU0 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.74■□□□□ 0.27
CD248Q9HCU0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CD248Q9HCU0 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.74■□□□□ 0.27
CD248Q9HCU0 AC013467.2-201ENST00000605472 835 ntBASIC16.74■□□□□ 0.27
CD248Q9HCU0 AL590560.3-201ENST00000623350 461 ntBASIC16.74■□□□□ 0.27
CD248Q9HCU0 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.74■□□□□ 0.27
CD248Q9HCU0 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CD248Q9HCU0 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CD248Q9HCU0 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.74■□□□□ 0.27
CD248Q9HCU0 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD248Q9HCU0 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD248Q9HCU0 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CD248Q9HCU0 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.74■□□□□ 0.27
CD248Q9HCU0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.74■□□□□ 0.27
CD248Q9HCU0 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD248Q9HCU0 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD248Q9HCU0 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.74■□□□□ 0.27
CD248Q9HCU0 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.74■□□□□ 0.27
CD248Q9HCU0 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD248Q9HCU0 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD248Q9HCU0 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CD248Q9HCU0 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD248Q9HCU0 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CD248Q9HCU0 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD248Q9HCU0 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD248Q9HCU0 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CD248Q9HCU0 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD248Q9HCU0 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.74■□□□□ 0.27
CD248Q9HCU0 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
CD248Q9HCU0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.73■□□□□ 0.27
CD248Q9HCU0 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.73■□□□□ 0.27
CD248Q9HCU0 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD248Q9HCU0 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
CD248Q9HCU0 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CD248Q9HCU0 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.73■□□□□ 0.27
CD248Q9HCU0 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD248Q9HCU0 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.73■□□□□ 0.27
CD248Q9HCU0 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
CD248Q9HCU0 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD248Q9HCU0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.73■□□□□ 0.27
CD248Q9HCU0 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
CD248Q9HCU0 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CD248Q9HCU0 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD248Q9HCU0 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CD248Q9HCU0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD248Q9HCU0 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.73■□□□□ 0.27
CD248Q9HCU0 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms