Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 MXI1-205ENST00000393134 889 ntTSL 2 BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 MYCLP2-201ENST00000449268 967 ntBASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 FUZ-207ENST00000526575 482 ntTSL 4 BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 HYMAI-201ENST00000635591 3347 ntBASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 AC098850.1-201ENST00000419919 790 ntBASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 AC112492.5-201ENST00000421897 457 ntBASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 CTBP2P3-201ENST00000585629 1255 ntBASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 KRT8P37-201ENST00000451609 1420 ntBASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 BNIP3P1-202ENST00000550043 1585 ntBASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 AC073347.1-201ENST00000421633 2643 ntBASIC19.16■□□□□ 0.66
RPAP1Q9BWH6 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPAP1Q9BWH6 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RPAP1Q9BWH6 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPAP1Q9BWH6 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC19.15■□□□□ 0.66
RPAP1Q9BWH6 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.15■□□□□ 0.66
RPAP1Q9BWH6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RPAP1Q9BWH6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPAP1Q9BWH6 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPAP1Q9BWH6 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RPAP1Q9BWH6 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPAP1Q9BWH6 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19.15■□□□□ 0.66
RPAP1Q9BWH6 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RPAP1Q9BWH6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.15■□□□□ 0.66
RPAP1Q9BWH6 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RPAP1Q9BWH6 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RPAP1Q9BWH6 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.15■□□□□ 0.66
RPAP1Q9BWH6 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC19.15■□□□□ 0.66
RPAP1Q9BWH6 NEU3-203ENST00000529024 581 ntTSL 3 BASIC19.15■□□□□ 0.66
RPAP1Q9BWH6 AL391069.4-201ENST00000609583 481 ntBASIC19.15■□□□□ 0.66
RPAP1Q9BWH6 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPAP1Q9BWH6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPAP1Q9BWH6 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPAP1Q9BWH6 PPT1-215ENST00000641471 2368 ntBASIC19.15■□□□□ 0.66
RPAP1Q9BWH6 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC19.15■□□□□ 0.66
RPAP1Q9BWH6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
RPAP1Q9BWH6 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
RPAP1Q9BWH6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RPAP1Q9BWH6 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms