Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSPG4P5Q96PW8 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSPG4P5Q96PW8 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.33■□□□□ 0.2
CSPG4P5Q96PW8 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSPG4P5Q96PW8 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.33■□□□□ 0.2
CSPG4P5Q96PW8 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.33■□□□□ 0.2
CSPG4P5Q96PW8 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSPG4P5Q96PW8 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSPG4P5Q96PW8 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 AC074338.1-201ENST00000416825 156 ntBASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 AC092580.3-201ENST00000430932 139 ntBASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSPG4P5Q96PW8 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 AC025048.3-201ENST00000590609 569 ntBASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 AC005702.4-201ENST00000618393 416 ntBASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.31■□□□□ 0.2
CSPG4P5Q96PW8 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.3■□□□□ 0.2
CSPG4P5Q96PW8 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms