Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 RCN1P2-201ENST00000398357 915 ntBASIC12.08□□□□□ -0.48
AP1S3Q96PC3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 AL353135.1-201ENST00000606729 504 ntBASIC12.08□□□□□ -0.48
AP1S3Q96PC3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 KRT8P39-201ENST00000396270 1433 ntBASIC12.08□□□□□ -0.48
AP1S3Q96PC3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 AL590787.1-201ENST00000568856 1315 ntBASIC12.08□□□□□ -0.48
AP1S3Q96PC3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.08□□□□□ -0.48
AP1S3Q96PC3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 AC010491.1-201ENST00000563101 2797 ntBASIC12.07□□□□□ -0.48
AP1S3Q96PC3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 AC007292.2-201ENST00000593524 1812 ntBASIC12.07□□□□□ -0.48
AP1S3Q96PC3 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 ZNF629-201ENST00000262525 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 AC023908.3-201ENST00000564211 3047 ntBASIC12.07□□□□□ -0.48
AP1S3Q96PC3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 DRAXINP1-201ENST00000437611 948 ntBASIC12.07□□□□□ -0.48
AP1S3Q96PC3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 TOB2P1-201ENST00000469761 992 ntBASIC12.07□□□□□ -0.48
AP1S3Q96PC3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms