Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.13□□□□□ -0.15
RFT1Q96AA3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.13□□□□□ -0.15
RFT1Q96AA3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
RFT1Q96AA3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.13□□□□□ -0.15
RFT1Q96AA3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
RFT1Q96AA3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.13□□□□□ -0.15
RFT1Q96AA3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
RFT1Q96AA3 AC117500.6-201ENST00000624871 588 ntBASIC14.13□□□□□ -0.15
RFT1Q96AA3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RFT1Q96AA3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RFT1Q96AA3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.13□□□□□ -0.15
RFT1Q96AA3 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
RFT1Q96AA3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
RFT1Q96AA3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RFT1Q96AA3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.13□□□□□ -0.15
RFT1Q96AA3 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RFT1Q96AA3 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RFT1Q96AA3 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RFT1Q96AA3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RFT1Q96AA3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
RFT1Q96AA3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
RFT1Q96AA3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 AL390755.1-201ENST00000623716 2027 ntBASIC14.12□□□□□ -0.15
RFT1Q96AA3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 LINC00552-201ENST00000625151 2579 ntBASIC14.12□□□□□ -0.15
RFT1Q96AA3 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
RFT1Q96AA3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.12□□□□□ -0.15
RFT1Q96AA3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.12□□□□□ -0.15
RFT1Q96AA3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.12□□□□□ -0.15
RFT1Q96AA3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.12□□□□□ -0.15
RFT1Q96AA3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.12□□□□□ -0.15
RFT1Q96AA3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 ACTL9-202ENST00000612068 1252 ntBASIC14.12□□□□□ -0.15
RFT1Q96AA3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
RFT1Q96AA3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
RFT1Q96AA3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.12□□□□□ -0.15
RFT1Q96AA3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 AC013726.1-201ENST00000563747 2285 ntBASIC14.12□□□□□ -0.15
RFT1Q96AA3 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
RFT1Q96AA3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.12□□□□□ -0.15
RFT1Q96AA3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFT1Q96AA3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.11□□□□□ -0.15
RFT1Q96AA3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFT1Q96AA3 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.11□□□□□ -0.15
RFT1Q96AA3 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
RFT1Q96AA3 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.11□□□□□ -0.15
RFT1Q96AA3 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFT1Q96AA3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RFT1Q96AA3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFT1Q96AA3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFT1Q96AA3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFT1Q96AA3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
RFT1Q96AA3 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RFT1Q96AA3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RFT1Q96AA3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RFT1Q96AA3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFT1Q96AA3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
RFT1Q96AA3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFT1Q96AA3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
RFT1Q96AA3 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.11□□□□□ -0.15
RFT1Q96AA3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFT1Q96AA3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
RFT1Q96AA3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.11□□□□□ -0.15
RFT1Q96AA3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFT1Q96AA3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFT1Q96AA3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.11□□□□□ -0.15
RFT1Q96AA3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.11□□□□□ -0.15
RFT1Q96AA3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.11□□□□□ -0.15
RFT1Q96AA3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFT1Q96AA3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.11□□□□□ -0.15
RFT1Q96AA3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.11□□□□□ -0.15
RFT1Q96AA3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.11□□□□□ -0.15
RFT1Q96AA3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.11□□□□□ -0.15
RFT1Q96AA3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms