Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TTC9Q92623 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.13■□□□□ 0.01
TTC9Q92623 AC092384.3-202ENST00000564646 2873 ntBASIC15.13■□□□□ 0.01
TTC9Q92623 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TTC9Q92623 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TTC9Q92623 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TTC9Q92623 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TTC9Q92623 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.13■□□□□ 0.01
TTC9Q92623 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.13■□□□□ 0.01
TTC9Q92623 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.12■□□□□ 0.01
TTC9Q92623 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.12■□□□□ 0.01
TTC9Q92623 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TTC9Q92623 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TTC9Q92623 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC9Q92623 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TTC9Q92623 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC9Q92623 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TTC9Q92623 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.12■□□□□ 0.01
TTC9Q92623 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC9Q92623 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC9Q92623 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.12■□□□□ 0.01
TTC9Q92623 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TTC9Q92623 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC9Q92623 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.12■□□□□ 0.01
TTC9Q92623 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
TTC9Q92623 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC9Q92623 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC9Q92623 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TTC9Q92623 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.12■□□□□ 0.01
TTC9Q92623 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.12■□□□□ 0.01
TTC9Q92623 USP32P1-208ENST00000506594 1164 ntBASIC15.12■□□□□ 0.01
TTC9Q92623 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.12■□□□□ 0.01
TTC9Q92623 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TTC9Q92623 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.12■□□□□ 0.01
TTC9Q92623 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.12■□□□□ 0.01
TTC9Q92623 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.12■□□□□ 0.01
TTC9Q92623 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.12■□□□□ 0.01
TTC9Q92623 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TTC9Q92623 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TTC9Q92623 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC9Q92623 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
TTC9Q92623 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.12■□□□□ 0.01
TTC9Q92623 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC9Q92623 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TTC9Q92623 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.12■□□□□ 0.01
TTC9Q92623 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
TTC9Q92623 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TTC9Q92623 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.12■□□□□ 0.01
TTC9Q92623 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TTC9Q92623 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC9Q92623 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC9Q92623 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC9Q92623 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.12■□□□□ 0.01
TTC9Q92623 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TTC9Q92623 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC9Q92623 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.11■□□□□ 0.01
TTC9Q92623 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.11■□□□□ 0.01
TTC9Q92623 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.11■□□□□ 0.01
TTC9Q92623 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC9Q92623 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TTC9Q92623 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TTC9Q92623 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC9Q92623 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC9Q92623 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TTC9Q92623 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.11■□□□□ 0.01
TTC9Q92623 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.11■□□□□ 0.01
TTC9Q92623 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
TTC9Q92623 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TTC9Q92623 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TTC9Q92623 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.11■□□□□ 0.01
TTC9Q92623 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.11■□□□□ 0.01
TTC9Q92623 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
TTC9Q92623 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.11■□□□□ 0.01
TTC9Q92623 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC9Q92623 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TTC9Q92623 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.11■□□□□ 0.01
TTC9Q92623 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TTC9Q92623 BRWD1P1-201ENST00000401091 371 ntBASIC15.11■□□□□ 0.01
TTC9Q92623 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.11■□□□□ 0.01
TTC9Q92623 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.11■□□□□ 0.01
TTC9Q92623 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.11■□□□□ 0.01
TTC9Q92623 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TTC9Q92623 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TTC9Q92623 RRP7BP-205ENST00000566851 833 ntBASIC15.11■□□□□ 0.01
TTC9Q92623 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.11■□□□□ 0.01
TTC9Q92623 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
TTC9Q92623 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.11■□□□□ 0.01
TTC9Q92623 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.11■□□□□ 0.01
TTC9Q92623 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.11■□□□□ 0.01
TTC9Q92623 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC9Q92623 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.11■□□□□ 0.01
TTC9Q92623 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.11■□□□□ 0.01
TTC9Q92623 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.11■□□□□ 0.01
TTC9Q92623 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC9Q92623 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TTC9Q92623 AC093525.8-201ENST00000624099 1342 ntBASIC15.11■□□□□ 0.01
TTC9Q92623 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
TTC9Q92623 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TTC9Q92623 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.11■□□□□ 0.01
TTC9Q92623 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms