Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 NUS1P2-201ENST00000417358 873 ntBASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 AC104819.1-201ENST00000504587 486 ntBASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 MIR4313-201ENST00000580760 101 ntBASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 AL591684.3-201ENST00000605187 298 ntBASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 AL031055.1-201ENST00000606362 631 ntBASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 AC005252.3-201ENST00000623855 2258 ntBASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SMIM4Q8WVI0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
SMIM4Q8WVI0 AC015656.1-201ENST00000624209 3578 ntBASIC13.58□□□□□ -0.23
SMIM4Q8WVI0 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
SMIM4Q8WVI0 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
SMIM4Q8WVI0 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.58□□□□□ -0.23
SMIM4Q8WVI0 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 AP002383.4-201ENST00000442518 975 ntBASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 AP002414.4-201ENST00000589764 1148 ntBASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 AC018892.3-201ENST00000623986 2499 ntBASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 REXO1L1P-202ENST00000608646 1974 ntBASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 AC006504.4-201ENST00000592118 1568 ntBASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
SMIM4Q8WVI0 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms