Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAF3IP1Q8TDR0 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
TRAF3IP1Q8TDR0 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 KRT18P32-201ENST00000424695 1287 ntBASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 RARRES2P9-201ENST00000565168 469 ntBASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 REXO1L1P-202ENST00000608646 1974 ntBASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TRAF3IP1Q8TDR0 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 AL136982.4-201ENST00000437689 1740 ntBASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 BX842568.4-201ENST00000421222 227 ntBASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 AC010327.4-202ENST00000591484 748 ntBASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 AC092384.3-202ENST00000564646 2873 ntBASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRAF3IP1Q8TDR0 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 AC073347.1-201ENST00000421633 2643 ntBASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms