Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AL391825.1-201ENST00000457671 1364 ntBASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 AL353779.1-201ENST00000434793 351 ntBASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 CRB3P1-201ENST00000449338 276 ntBASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 AC055876.2-201ENST00000531834 546 ntBASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 AC190387.1-201ENST00000551683 408 ntBASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 MIR4313-201ENST00000580760 101 ntBASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 AL035633.1-201ENST00000406139 838 ntBASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 AC087499.6-201ENST00000411576 835 ntBASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 AC023310.3-201ENST00000557027 670 ntBASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 AC100756.1-201ENST00000562736 682 ntBASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 AC138749.3-201ENST00000567691 622 ntBASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 AC116165.1-201ENST00000611806 668 ntBASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.53■□□□□ 0.08
LRRTM4Q86VH4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRRTM4Q86VH4 PCDHA1-201ENST00000378133 2726 ntBASIC15.52■□□□□ 0.08
LRRTM4Q86VH4 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRRTM4Q86VH4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.52■□□□□ 0.08
LRRTM4Q86VH4 SLC7A15P-201ENST00000424028 1363 ntBASIC15.52■□□□□ 0.08
LRRTM4Q86VH4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRRTM4Q86VH4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRTM4Q86VH4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRTM4Q86VH4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
LRRTM4Q86VH4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRTM4Q86VH4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.52■□□□□ 0.08
LRRTM4Q86VH4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.52■□□□□ 0.08
LRRTM4Q86VH4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.52■□□□□ 0.08
LRRTM4Q86VH4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.52■□□□□ 0.08
LRRTM4Q86VH4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.52■□□□□ 0.08
LRRTM4Q86VH4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.52■□□□□ 0.08
LRRTM4Q86VH4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.52■□□□□ 0.08
LRRTM4Q86VH4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.52■□□□□ 0.08
LRRTM4Q86VH4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.52■□□□□ 0.08
LRRTM4Q86VH4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.52■□□□□ 0.08
LRRTM4Q86VH4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms