Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LYSMD3Q7Z3D4 AP005117.1-202ENST00000581724 1908 ntBASIC15.96■□□□□ 0.14
LYSMD3Q7Z3D4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LYSMD3Q7Z3D4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
LYSMD3Q7Z3D4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 RN7SL618P-201ENST00000477850 296 ntBASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 AC010336.2-201ENST00000564226 506 ntBASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 AL844908.2-201ENST00000609461 460 ntBASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 MIR6069-201ENST00000620069 79 ntBASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD3Q7Z3D4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 AC087499.5-201ENST00000452760 1342 ntBASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 HNRNPUP1-201ENST00000554987 333 ntBASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
LYSMD3Q7Z3D4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.93■□□□□ 0.14
LYSMD3Q7Z3D4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms