Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 Z97205.2-201ENST00000564697 1639 ntBASIC15.22■□□□□ 0.03
RNF44Q7L0R7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 MIR661-201ENST00000384842 89 ntBASIC15.22■□□□□ 0.03
RNF44Q7L0R7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 AC136604.1-201ENST00000418535 575 ntBASIC15.22■□□□□ 0.03
RNF44Q7L0R7 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 AC009118.2-201ENST00000613275 655 ntBASIC15.22■□□□□ 0.03
RNF44Q7L0R7 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.22■□□□□ 0.03
RNF44Q7L0R7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 AC112504.1-201ENST00000623415 1841 ntBASIC15.22■□□□□ 0.03
RNF44Q7L0R7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 AL391005.1-201ENST00000623953 2435 ntBASIC15.22■□□□□ 0.03
RNF44Q7L0R7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF44Q7L0R7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF44Q7L0R7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF44Q7L0R7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RNF44Q7L0R7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF44Q7L0R7 AC026691.1-201ENST00000602502 2017 ntBASIC15.21■□□□□ 0.03
RNF44Q7L0R7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RNF44Q7L0R7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RNF44Q7L0R7 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF44Q7L0R7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF44Q7L0R7 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF44Q7L0R7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.21■□□□□ 0.03
RNF44Q7L0R7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF44Q7L0R7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.21■□□□□ 0.03
RNF44Q7L0R7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF44Q7L0R7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.21■□□□□ 0.03
RNF44Q7L0R7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF44Q7L0R7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RNF44Q7L0R7 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.21■□□□□ 0.03
RNF44Q7L0R7 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF44Q7L0R7 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.21■□□□□ 0.03
RNF44Q7L0R7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.21■□□□□ 0.03
RNF44Q7L0R7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RNF44Q7L0R7 AC135586.1-201ENST00000539323 574 ntBASIC15.21■□□□□ 0.03
RNF44Q7L0R7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.21■□□□□ 0.03
RNF44Q7L0R7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.21■□□□□ 0.03
RNF44Q7L0R7 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF44Q7L0R7 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF44Q7L0R7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF44Q7L0R7 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF44Q7L0R7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF44Q7L0R7 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF44Q7L0R7 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.21■□□□□ 0.02
RNF44Q7L0R7 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
RNF44Q7L0R7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
RNF44Q7L0R7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
RNF44Q7L0R7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.21■□□□□ 0.02
RNF44Q7L0R7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.21■□□□□ 0.02
RNF44Q7L0R7 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RNF44Q7L0R7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF44Q7L0R7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
RNF44Q7L0R7 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF44Q7L0R7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 TSPY26P-202ENST00000565928 3884 ntBASIC15.2■□□□□ 0.02
RNF44Q7L0R7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RNF44Q7L0R7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.2■□□□□ 0.02
RNF44Q7L0R7 AL161772.1-201ENST00000610494 4412 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms