Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13CQ709C8 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13CQ709C8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13CQ709C8 AC009093.2-202ENST00000620513 2079 ntBASIC12.93□□□□□ -0.34
VPS13CQ709C8 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
VPS13CQ709C8 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
VPS13CQ709C8 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13CQ709C8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13CQ709C8 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13CQ709C8 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13CQ709C8 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13CQ709C8 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13CQ709C8 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC12.93□□□□□ -0.34
VPS13CQ709C8 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
VPS13CQ709C8 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13CQ709C8 NKG7-204ENST00000595217 816 ntTSL 2 BASIC12.93□□□□□ -0.34
VPS13CQ709C8 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13CQ709C8 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13CQ709C8 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13CQ709C8 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
VPS13CQ709C8 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13CQ709C8 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.92□□□□□ -0.34
VPS13CQ709C8 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC12.92□□□□□ -0.34
VPS13CQ709C8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC12.92□□□□□ -0.34
VPS13CQ709C8 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.92□□□□□ -0.34
VPS13CQ709C8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC12.92□□□□□ -0.34
VPS13CQ709C8 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13CQ709C8 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13CQ709C8 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC12.92□□□□□ -0.34
VPS13CQ709C8 MBP-227ENST00000526111 581 ntTSL 4 BASIC12.92□□□□□ -0.34
VPS13CQ709C8 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC12.92□□□□□ -0.34
VPS13CQ709C8 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
VPS13CQ709C8 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13CQ709C8 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13CQ709C8 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13CQ709C8 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
VPS13CQ709C8 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13CQ709C8 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13CQ709C8 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.92□□□□□ -0.34
VPS13CQ709C8 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13CQ709C8 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13CQ709C8 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
VPS13CQ709C8 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13CQ709C8 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.92□□□□□ -0.34
VPS13CQ709C8 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13CQ709C8 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13CQ709C8 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13CQ709C8 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.92□□□□□ -0.34
VPS13CQ709C8 AC012618.1-201ENST00000461223 412 ntBASIC12.92□□□□□ -0.34
VPS13CQ709C8 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13CQ709C8 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
VPS13CQ709C8 PCDHA14-201ENST00000506751 2298 ntBASIC12.92□□□□□ -0.34
VPS13CQ709C8 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.92□□□□□ -0.34
VPS13CQ709C8 AC009486.1-201ENST00000569860 813 ntBASIC12.92□□□□□ -0.34
VPS13CQ709C8 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.92□□□□□ -0.34
VPS13CQ709C8 AC025181.2-201ENST00000606994 802 ntBASIC12.92□□□□□ -0.34
VPS13CQ709C8 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
VPS13CQ709C8 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
VPS13CQ709C8 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.92□□□□□ -0.34
VPS13CQ709C8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13CQ709C8 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13CQ709C8 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.92□□□□□ -0.34
VPS13CQ709C8 AL158070.2-201ENST00000623713 1621 ntBASIC12.92□□□□□ -0.34
VPS13CQ709C8 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.92□□□□□ -0.34
VPS13CQ709C8 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
VPS13CQ709C8 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13CQ709C8 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.92□□□□□ -0.34
VPS13CQ709C8 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13CQ709C8 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC12.92□□□□□ -0.34
VPS13CQ709C8 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13CQ709C8 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC12.92□□□□□ -0.34
VPS13CQ709C8 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC12.92□□□□□ -0.34
VPS13CQ709C8 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.92□□□□□ -0.34
VPS13CQ709C8 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
VPS13CQ709C8 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13CQ709C8 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13CQ709C8 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13CQ709C8 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
VPS13CQ709C8 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.91□□□□□ -0.34
VPS13CQ709C8 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.91□□□□□ -0.34
VPS13CQ709C8 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.91□□□□□ -0.34
VPS13CQ709C8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC12.91□□□□□ -0.34
VPS13CQ709C8 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13CQ709C8 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
VPS13CQ709C8 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13CQ709C8 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
VPS13CQ709C8 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13CQ709C8 CTBP2P4-201ENST00000513884 920 ntBASIC12.91□□□□□ -0.34
VPS13CQ709C8 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
VPS13CQ709C8 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC12.91□□□□□ -0.34
VPS13CQ709C8 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.91□□□□□ -0.34
VPS13CQ709C8 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.91□□□□□ -0.34
VPS13CQ709C8 AL353726.2-201ENST00000623259 884 ntBASIC12.91□□□□□ -0.34
VPS13CQ709C8 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13CQ709C8 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13CQ709C8 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13CQ709C8 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
VPS13CQ709C8 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13CQ709C8 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.91□□□□□ -0.34
VPS13CQ709C8 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms