Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
H3F3CQ6NXT2 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
H3F3CQ6NXT2 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.68□□□□□ -0.06
H3F3CQ6NXT2 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.68□□□□□ -0.06
H3F3CQ6NXT2 AC074338.1-201ENST00000416825 156 ntBASIC14.68□□□□□ -0.06
H3F3CQ6NXT2 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
H3F3CQ6NXT2 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.68□□□□□ -0.06
H3F3CQ6NXT2 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.68□□□□□ -0.06
H3F3CQ6NXT2 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
H3F3CQ6NXT2 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.68□□□□□ -0.06
H3F3CQ6NXT2 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.68□□□□□ -0.06
H3F3CQ6NXT2 LINC01115-203ENST00000606068 577 ntBASIC14.68□□□□□ -0.06
H3F3CQ6NXT2 AC007431.3-201ENST00000623221 587 ntBASIC14.68□□□□□ -0.06
H3F3CQ6NXT2 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.68□□□□□ -0.06
H3F3CQ6NXT2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H3F3CQ6NXT2 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
H3F3CQ6NXT2 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
H3F3CQ6NXT2 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
H3F3CQ6NXT2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
H3F3CQ6NXT2 AC023824.1-201ENST00000562945 2975 ntBASIC14.68□□□□□ -0.06
H3F3CQ6NXT2 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H3F3CQ6NXT2 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.68□□□□□ -0.06
H3F3CQ6NXT2 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
H3F3CQ6NXT2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
H3F3CQ6NXT2 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
H3F3CQ6NXT2 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.68□□□□□ -0.06
H3F3CQ6NXT2 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H3F3CQ6NXT2 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 AP006294.1-201ENST00000415407 339 ntBASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 TOMM22P5-201ENST00000416399 439 ntBASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 MYCLP2-201ENST00000449268 967 ntBASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 AC123567.1-201ENST00000548294 1261 ntBASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 TMEM261P1-201ENST00000604899 340 ntBASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 REXO1L1P-202ENST00000608646 1974 ntBASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 AC134407.2-201ENST00000625089 1978 ntBASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
H3F3CQ6NXT2 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
H3F3CQ6NXT2 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.66□□□□□ -0.06
H3F3CQ6NXT2 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
H3F3CQ6NXT2 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.66□□□□□ -0.06
H3F3CQ6NXT2 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.66□□□□□ -0.06
H3F3CQ6NXT2 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
H3F3CQ6NXT2 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
H3F3CQ6NXT2 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
H3F3CQ6NXT2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
H3F3CQ6NXT2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
H3F3CQ6NXT2 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H3F3CQ6NXT2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
H3F3CQ6NXT2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
H3F3CQ6NXT2 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H3F3CQ6NXT2 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
H3F3CQ6NXT2 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H3F3CQ6NXT2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.66□□□□□ -0.06
H3F3CQ6NXT2 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
H3F3CQ6NXT2 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.66□□□□□ -0.06
H3F3CQ6NXT2 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
H3F3CQ6NXT2 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
H3F3CQ6NXT2 AC136604.1-201ENST00000418535 575 ntBASIC14.66□□□□□ -0.06
H3F3CQ6NXT2 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.66□□□□□ -0.06
H3F3CQ6NXT2 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.66□□□□□ -0.06
H3F3CQ6NXT2 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.66□□□□□ -0.06
H3F3CQ6NXT2 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.66□□□□□ -0.06
H3F3CQ6NXT2 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.66□□□□□ -0.06
H3F3CQ6NXT2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms