Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 RN7SL618P-201ENST00000477850 296 ntBASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 AC004890.2-204ENST00000481968 304 ntBASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 MIR6069-201ENST00000620069 79 ntBASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TTC39BQ5VTQ0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 AC144831.1-201ENST00000573312 2656 ntBASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TTC39BQ5VTQ0 PRAL-201ENST00000624952 3286 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms