Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRK2Q5S007 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LRRK2Q5S007 ISCA2P1-201ENST00000425548 448 ntBASIC13.51□□□□□ -0.25
LRRK2Q5S007 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC13.51□□□□□ -0.25
LRRK2Q5S007 SAMD11P1-201ENST00000571429 661 ntBASIC13.51□□□□□ -0.25
LRRK2Q5S007 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC13.51□□□□□ -0.25
LRRK2Q5S007 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LRRK2Q5S007 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRK2Q5S007 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.51□□□□□ -0.25
LRRK2Q5S007 UBALD1-205ENST00000590891 2641 ntBASIC13.51□□□□□ -0.25
LRRK2Q5S007 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.51□□□□□ -0.25
LRRK2Q5S007 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRK2Q5S007 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRK2Q5S007 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRK2Q5S007 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
LRRK2Q5S007 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRK2Q5S007 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRK2Q5S007 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRK2Q5S007 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.5□□□□□ -0.25
LRRK2Q5S007 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRK2Q5S007 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRK2Q5S007 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRK2Q5S007 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LRRK2Q5S007 GGT3P-204ENST00000453783 1664 ntBASIC13.5□□□□□ -0.25
LRRK2Q5S007 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LRRK2Q5S007 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
LRRK2Q5S007 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRK2Q5S007 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC13.5□□□□□ -0.25
LRRK2Q5S007 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRK2Q5S007 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRK2Q5S007 AC100850.1-201ENST00000506768 649 ntBASIC13.5□□□□□ -0.25
LRRK2Q5S007 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRK2Q5S007 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRK2Q5S007 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
LRRK2Q5S007 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRK2Q5S007 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC13.5□□□□□ -0.25
LRRK2Q5S007 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
LRRK2Q5S007 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRK2Q5S007 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
LRRK2Q5S007 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
LRRK2Q5S007 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRK2Q5S007 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRK2Q5S007 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRK2Q5S007 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRK2Q5S007 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
LRRK2Q5S007 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRK2Q5S007 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.5□□□□□ -0.25
LRRK2Q5S007 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC13.5□□□□□ -0.25
LRRK2Q5S007 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC13.5□□□□□ -0.25
LRRK2Q5S007 AL132994.2-201ENST00000603120 687 ntBASIC13.5□□□□□ -0.25
LRRK2Q5S007 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRK2Q5S007 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
LRRK2Q5S007 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.5□□□□□ -0.25
LRRK2Q5S007 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRK2Q5S007 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRK2Q5S007 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.5□□□□□ -0.25
LRRK2Q5S007 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
LRRK2Q5S007 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRK2Q5S007 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.49□□□□□ -0.25
LRRK2Q5S007 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
LRRK2Q5S007 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRK2Q5S007 AC067852.2-201ENST00000590513 2313 ntBASIC13.49□□□□□ -0.25
LRRK2Q5S007 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRK2Q5S007 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.49□□□□□ -0.25
LRRK2Q5S007 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRK2Q5S007 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
LRRK2Q5S007 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LRRK2Q5S007 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LRRK2Q5S007 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LRRK2Q5S007 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.49□□□□□ -0.25
LRRK2Q5S007 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC13.49□□□□□ -0.25
LRRK2Q5S007 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LRRK2Q5S007 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
LRRK2Q5S007 AC103988.2-201ENST00000561804 725 ntBASIC13.49□□□□□ -0.25
LRRK2Q5S007 HKR1-225ENST00000592168 566 ntTSL 4 BASIC13.49□□□□□ -0.25
LRRK2Q5S007 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRK2Q5S007 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LRRK2Q5S007 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LRRK2Q5S007 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRK2Q5S007 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
LRRK2Q5S007 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRK2Q5S007 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.49□□□□□ -0.25
LRRK2Q5S007 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LRRK2Q5S007 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LRRK2Q5S007 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
LRRK2Q5S007 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.49□□□□□ -0.25
LRRK2Q5S007 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC13.49□□□□□ -0.25
LRRK2Q5S007 PCDHB18P-201ENST00000524813 2368 ntBASIC13.49□□□□□ -0.25
LRRK2Q5S007 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC13.49□□□□□ -0.25
LRRK2Q5S007 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LRRK2Q5S007 KRT8P21-201ENST00000430398 1491 ntBASIC13.49□□□□□ -0.25
LRRK2Q5S007 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRK2Q5S007 AL512430.1-201ENST00000392575 860 ntBASIC13.49□□□□□ -0.25
LRRK2Q5S007 GHSR-202ENST00000427970 912 ntBASIC13.49□□□□□ -0.25
LRRK2Q5S007 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC13.49□□□□□ -0.25
LRRK2Q5S007 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.49□□□□□ -0.25
LRRK2Q5S007 TUBB8P8-201ENST00000458717 1058 ntBASIC13.49□□□□□ -0.25
LRRK2Q5S007 RN7SL67P-201ENST00000492147 296 ntBASIC13.49□□□□□ -0.25
LRRK2Q5S007 ALG1L13P-202ENST00000519320 584 ntBASIC13.49□□□□□ -0.25
LRRK2Q5S007 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms