Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC11.28□□□□□ -0.6
RPL39P62891 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
RPL39P62891 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 PAN3-AS1-201ENST00000563843 1351 ntBASIC11.28□□□□□ -0.6
RPL39P62891 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC11.28□□□□□ -0.6
RPL39P62891 TKT-202ENST00000423516 2075 ntTSL 2 BASIC11.28□□□□□ -0.6
RPL39P62891 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
RPL39P62891 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC11.27□□□□□ -0.6
RPL39P62891 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.6
RPL39P62891 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
RPL39P62891 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC11.27□□□□□ -0.6
RPL39P62891 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC11.27□□□□□ -0.6
RPL39P62891 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
RPL39P62891 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
RPL39P62891 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
RPL39P62891 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
RPL39P62891 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
RPL39P62891 AC005912.2-201ENST00000619492 2400 ntBASIC11.27□□□□□ -0.6
RPL39P62891 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
RPL39P62891 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
RPL39P62891 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RPL39P62891 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC11.27□□□□□ -0.61
RPL39P62891 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RPL39P62891 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
RPL39P62891 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RPL39P62891 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
RPL39P62891 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC11.27□□□□□ -0.61
RPL39P62891 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RPL39P62891 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RPL39P62891 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC11.27□□□□□ -0.61
RPL39P62891 RNU1-129P-201ENST00000384064 167 ntBASIC11.27□□□□□ -0.61
RPL39P62891 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RPL39P62891 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC11.27□□□□□ -0.61
RPL39P62891 AC026396.1-201ENST00000419388 421 ntBASIC11.27□□□□□ -0.61
RPL39P62891 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RPL39P62891 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC11.27□□□□□ -0.61
RPL39P62891 AC093724.1-201ENST00000448659 1027 ntBASIC11.27□□□□□ -0.61
RPL39P62891 AC245100.5-201ENST00000452108 331 ntBASIC11.27□□□□□ -0.61
RPL39P62891 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC11.27□□□□□ -0.61
RPL39P62891 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
RPL39P62891 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC11.27□□□□□ -0.61
RPL39P62891 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC11.27□□□□□ -0.61
RPL39P62891 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RPL39P62891 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC11.27□□□□□ -0.61
RPL39P62891 U1.21-201ENST00000580816 167 ntBASIC11.27□□□□□ -0.61
RPL39P62891 AC006557.2-201ENST00000592985 1240 ntBASIC11.27□□□□□ -0.61
RPL39P62891 AL031055.1-201ENST00000606362 631 ntBASIC11.27□□□□□ -0.61
RPL39P62891 NPAP1P7-201ENST00000613027 823 ntBASIC11.27□□□□□ -0.61
RPL39P62891 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC11.27□□□□□ -0.61
RPL39P62891 AL355877.3-201ENST00000622820 899 ntBASIC11.27□□□□□ -0.61
RPL39P62891 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RPL39P62891 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
RPL39P62891 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RPL39P62891 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RPL39P62891 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RPL39P62891 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC11.27□□□□□ -0.61
RPL39P62891 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RPL39P62891 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
RPL39P62891 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
RPL39P62891 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
RPL39P62891 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
RPL39P62891 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RPL39P62891 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
RPL39P62891 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
RPL39P62891 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
RPL39P62891 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RPL39P62891 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC11.27□□□□□ -0.61
RPL39P62891 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC11.27□□□□□ -0.61
RPL39P62891 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RPL39P62891 FGD5P1-202ENST00000614866 2498 ntBASIC11.27□□□□□ -0.61
RPL39P62891 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RPL39P62891 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC11.27□□□□□ -0.61
RPL39P62891 LRRFIP1P1-201ENST00000498774 2246 ntBASIC11.27□□□□□ -0.61
RPL39P62891 PTENP1-202ENST00000532280 3996 ntBASIC11.26□□□□□ -0.61
RPL39P62891 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RPL39P62891 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RPL39P62891 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC11.26□□□□□ -0.61
RPL39P62891 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RPL39P62891 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC11.26□□□□□ -0.61
RPL39P62891 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC11.26□□□□□ -0.61
RPL39P62891 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RPL39P62891 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC11.26□□□□□ -0.61
RPL39P62891 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RPL39P62891 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RPL39P62891 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC11.26□□□□□ -0.61
RPL39P62891 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
RPL39P62891 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RPL39P62891 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
RPL39P62891 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
RPL39P62891 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
RPL39P62891 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC11.26□□□□□ -0.61
RPL39P62891 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
RPL39P62891 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms