Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VBP1P61758 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.28□□□□□ -0.12
VBP1P61758 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VBP1P61758 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VBP1P61758 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VBP1P61758 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VBP1P61758 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VBP1P61758 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VBP1P61758 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VBP1P61758 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VBP1P61758 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
VBP1P61758 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VBP1P61758 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VBP1P61758 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
VBP1P61758 AC087163.2-201ENST00000457299 853 ntBASIC14.28□□□□□ -0.12
VBP1P61758 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
VBP1P61758 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VBP1P61758 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.28□□□□□ -0.12
VBP1P61758 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
VBP1P61758 AC087641.1-201ENST00000557561 1021 ntBASIC14.28□□□□□ -0.12
VBP1P61758 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.28□□□□□ -0.12
VBP1P61758 HYMAI.1-201ENST00000620949 238 ntBASIC14.28□□□□□ -0.12
VBP1P61758 AP001350.2-201ENST00000625104 1094 ntBASIC14.28□□□□□ -0.12
VBP1P61758 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.28□□□□□ -0.12
VBP1P61758 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.28□□□□□ -0.12
VBP1P61758 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VBP1P61758 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VBP1P61758 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VBP1P61758 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VBP1P61758 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
VBP1P61758 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VBP1P61758 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.28□□□□□ -0.12
VBP1P61758 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VBP1P61758 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
VBP1P61758 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VBP1P61758 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
VBP1P61758 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
VBP1P61758 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
VBP1P61758 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VBP1P61758 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.27□□□□□ -0.12
VBP1P61758 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VBP1P61758 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.27□□□□□ -0.12
VBP1P61758 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
VBP1P61758 AL353732.1-201ENST00000569618 1459 ntBASIC14.27□□□□□ -0.12
VBP1P61758 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
VBP1P61758 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VBP1P61758 CICP8-201ENST00000455800 2813 ntBASIC14.27□□□□□ -0.12
VBP1P61758 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
VBP1P61758 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.27□□□□□ -0.12
VBP1P61758 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.27□□□□□ -0.13
VBP1P61758 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VBP1P61758 MIR718-201ENST00000390190 70 ntBASIC14.27□□□□□ -0.13
VBP1P61758 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.27□□□□□ -0.13
VBP1P61758 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC14.27□□□□□ -0.13
VBP1P61758 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VBP1P61758 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
VBP1P61758 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.27□□□□□ -0.13
VBP1P61758 AL160237.2-201ENST00000556165 472 ntBASIC14.27□□□□□ -0.13
VBP1P61758 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.27□□□□□ -0.13
VBP1P61758 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC14.27□□□□□ -0.13
VBP1P61758 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VBP1P61758 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
VBP1P61758 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VBP1P61758 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VBP1P61758 AC097359.2-201ENST00000604992 2389 ntBASIC14.27□□□□□ -0.13
VBP1P61758 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.27□□□□□ -0.13
VBP1P61758 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.27□□□□□ -0.13
VBP1P61758 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VBP1P61758 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VBP1P61758 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VBP1P61758 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VBP1P61758 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.27□□□□□ -0.13
VBP1P61758 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
VBP1P61758 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
VBP1P61758 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.27□□□□□ -0.13
VBP1P61758 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
VBP1P61758 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.27□□□□□ -0.13
VBP1P61758 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VBP1P61758 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.26□□□□□ -0.13
VBP1P61758 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.26□□□□□ -0.13
VBP1P61758 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
VBP1P61758 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
VBP1P61758 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
VBP1P61758 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.26□□□□□ -0.13
VBP1P61758 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
VBP1P61758 MBLAC2-202ENST00000514906 1936 ntBASIC14.26□□□□□ -0.13
VBP1P61758 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms