Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.42□□□□□ -0.42
RAB5BP61020 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
RAB5BP61020 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.42□□□□□ -0.42
RAB5BP61020 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB5BP61020 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB5BP61020 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB5BP61020 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB5BP61020 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.42□□□□□ -0.42
RAB5BP61020 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB5BP61020 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.42□□□□□ -0.42
RAB5BP61020 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB5BP61020 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB5BP61020 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
RAB5BP61020 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB5BP61020 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.42□□□□□ -0.42
RAB5BP61020 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB5BP61020 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
RAB5BP61020 MIR663A-201ENST00000385250 93 ntBASIC12.42□□□□□ -0.42
RAB5BP61020 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB5BP61020 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB5BP61020 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC12.42□□□□□ -0.42
RAB5BP61020 AP002982.1-201ENST00000492365 877 ntBASIC12.42□□□□□ -0.42
RAB5BP61020 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC12.42□□□□□ -0.42
RAB5BP61020 REEP1-209ENST00000541910 969 ntTSL 2 BASIC12.42□□□□□ -0.42
RAB5BP61020 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC12.42□□□□□ -0.42
RAB5BP61020 TMED1-207ENST00000591695 809 ntTSL 5 BASIC12.42□□□□□ -0.42
RAB5BP61020 AC022517.1-201ENST00000592429 346 ntBASIC12.42□□□□□ -0.42
RAB5BP61020 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC12.42□□□□□ -0.42
RAB5BP61020 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB5BP61020 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.42□□□□□ -0.42
RAB5BP61020 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB5BP61020 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB5BP61020 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB5BP61020 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB5BP61020 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB5BP61020 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB5BP61020 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB5BP61020 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB5BP61020 DNM1P41-201ENST00000623634 3350 ntBASIC12.42□□□□□ -0.42
RAB5BP61020 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
RAB5BP61020 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB5BP61020 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.42□□□□□ -0.42
RAB5BP61020 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB5BP61020 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
RAB5BP61020 AC130686.1-201ENST00000622936 2466 ntBASIC12.42□□□□□ -0.42
RAB5BP61020 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB5BP61020 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB5BP61020 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.41□□□□□ -0.42
RAB5BP61020 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.41□□□□□ -0.42
RAB5BP61020 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
RAB5BP61020 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.41□□□□□ -0.42
RAB5BP61020 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB5BP61020 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB5BP61020 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.41□□□□□ -0.42
RAB5BP61020 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RAB5BP61020 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB5BP61020 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB5BP61020 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.41□□□□□ -0.42
RAB5BP61020 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB5BP61020 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB5BP61020 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB5BP61020 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB5BP61020 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB5BP61020 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB5BP61020 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.41□□□□□ -0.42
RAB5BP61020 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.41□□□□□ -0.42
RAB5BP61020 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB5BP61020 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
RAB5BP61020 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC12.41□□□□□ -0.42
RAB5BP61020 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB5BP61020 FAM8A3P-201ENST00000427218 844 ntBASIC12.41□□□□□ -0.42
RAB5BP61020 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC12.41□□□□□ -0.42
RAB5BP61020 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB5BP61020 AL162430.1-201ENST00000480705 870 ntBASIC12.41□□□□□ -0.42
RAB5BP61020 CA15P1-201ENST00000481698 905 ntBASIC12.41□□□□□ -0.42
RAB5BP61020 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB5BP61020 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC12.41□□□□□ -0.42
RAB5BP61020 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RAB5BP61020 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC12.41□□□□□ -0.42
RAB5BP61020 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB5BP61020 AC112497.1-201ENST00000624824 639 ntBASIC12.41□□□□□ -0.42
RAB5BP61020 PGM5P2-202ENST00000637225 1043 ntBASIC12.41□□□□□ -0.42
RAB5BP61020 AC073111.5-205ENST00000641717 521 ntBASIC12.41□□□□□ -0.42
RAB5BP61020 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB5BP61020 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.41□□□□□ -0.42
RAB5BP61020 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB5BP61020 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB5BP61020 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RAB5BP61020 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB5BP61020 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
RAB5BP61020 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB5BP61020 AL021920.2-201ENST00000624828 1351 ntBASIC12.41□□□□□ -0.42
RAB5BP61020 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
RAB5BP61020 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB5BP61020 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
RAB5BP61020 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB5BP61020 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB5BP61020 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.41□□□□□ -0.42
RAB5BP61020 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.41□□□□□ -0.42
RAB5BP61020 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms