Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42P60953 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42P60953 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.57□□□□□ -0.08
CDC42P60953 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CDC42P60953 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42P60953 AC007686.3-201ENST00000619017 3487 ntBASIC14.57□□□□□ -0.08
CDC42P60953 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
CDC42P60953 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42P60953 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42P60953 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42P60953 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42P60953 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42P60953 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42P60953 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CDC42P60953 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CDC42P60953 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CDC42P60953 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CDC42P60953 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42P60953 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CDC42P60953 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42P60953 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CDC42P60953 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42P60953 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.56□□□□□ -0.08
CDC42P60953 LINC00528-201ENST00000600723 2160 ntBASIC14.56□□□□□ -0.08
CDC42P60953 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42P60953 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CDC42P60953 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42P60953 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42P60953 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.56□□□□□ -0.08
CDC42P60953 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.56□□□□□ -0.08
CDC42P60953 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.56□□□□□ -0.08
CDC42P60953 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42P60953 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.56□□□□□ -0.08
CDC42P60953 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42P60953 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42P60953 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.56□□□□□ -0.08
CDC42P60953 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.56□□□□□ -0.08
CDC42P60953 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.56□□□□□ -0.08
CDC42P60953 ACTL9-202ENST00000612068 1252 ntBASIC14.56□□□□□ -0.08
CDC42P60953 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42P60953 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CDC42P60953 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42P60953 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.56□□□□□ -0.08
CDC42P60953 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.56□□□□□ -0.08
CDC42P60953 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42P60953 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42P60953 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42P60953 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42P60953 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42P60953 ST20-AS1-201ENST00000560255 4223 ntBASIC14.55□□□□□ -0.08
CDC42P60953 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.55□□□□□ -0.08
CDC42P60953 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.55□□□□□ -0.08
CDC42P60953 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42P60953 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
CDC42P60953 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CDC42P60953 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CDC42P60953 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42P60953 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42P60953 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42P60953 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42P60953 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CDC42P60953 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42P60953 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42P60953 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.55□□□□□ -0.08
CDC42P60953 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42P60953 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.55□□□□□ -0.08
CDC42P60953 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.55□□□□□ -0.08
CDC42P60953 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.55□□□□□ -0.08
CDC42P60953 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.55□□□□□ -0.08
CDC42P60953 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
CDC42P60953 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.55□□□□□ -0.08
CDC42P60953 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.55□□□□□ -0.08
CDC42P60953 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.55□□□□□ -0.08
CDC42P60953 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.55□□□□□ -0.08
CDC42P60953 AL121772.3-201ENST00000610840 674 ntBASIC14.55□□□□□ -0.08
CDC42P60953 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.55□□□□□ -0.08
CDC42P60953 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42P60953 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CDC42P60953 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42P60953 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42P60953 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42P60953 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CDC42P60953 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42P60953 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42P60953 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42P60953 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.55□□□□□ -0.08
CDC42P60953 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42P60953 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42P60953 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CDC42P60953 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42P60953 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42P60953 GRK6P1-201ENST00000400595 1711 ntBASIC14.55□□□□□ -0.08
CDC42P60953 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42P60953 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CDC42P60953 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.55□□□□□ -0.08
CDC42P60953 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CDC42P60953 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CDC42P60953 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDC42P60953 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDC42P60953 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms